RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 AKR1B1P15121 316 aa16.73■□□□□ 0.27
TPM4-205ENST00000586833 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
TPM4-205ENST00000586833 CRHR2Q13324 411 aa16.73■□□□□ 0.27
TPM4-205ENST00000586833 KIF22Q14807 665 aa16.73■□□□□ 0.27
TPM4-205ENST00000586833 SEPT2Q15019 361 aa16.73■□□□□ 0.27
TPM4-205ENST00000586833 SMCR8Q8TEV9 937 aaPredicted RBP16.73■□□□□ 0.27
TPM4-205ENST00000586833 GTF3C2Q8WUA4 911 aaPredicted RBP16.73■□□□□ 0.27
TPM4-205ENST00000586833 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
TPM4-205ENST00000586833 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
TPM4-205ENST00000586833 MYO5AQ9Y4I1 1855 aaKnown RBP16.73■□□□□ 0.27
TPM4-205ENST00000586833 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
TPM4-205ENST00000586833 TLR2O60603 784 aa16.72■□□□□ 0.27
TPM4-205ENST00000586833 ATP2B2Q01814 1243 aa16.72■□□□□ 0.27
TPM4-205ENST00000586833 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
TPM4-205ENST00000586833 FOCADQ5VW36 1801 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 RASA1P20936 1047 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 JAG1P78504 1218 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 LPAR1Q92633 364 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 C12orf42Q96LP6 360 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 GOPCQ9HD26 462 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
TPM4-205ENST00000586833 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
TPM4-205ENST00000586833 SGSM2O43147 1006 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
TPM4-205ENST00000586833 CDC45O75419 566 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 PRDM1O75626 825 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 GCLCP48506 637 aaPredicted RBP16.7■□□□□ 0.26
TPM4-205ENST00000586833 TFAP4Q01664 338 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 SP3Q02447 781 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 EVX2Q03828 476 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 MOGSQ13724 837 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 ZNF296Q8WUU4 475 aaPredicted RBP16.7■□□□□ 0.26
TPM4-205ENST00000586833 SYNPO2Q9UMS6 1093 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 MYH7P12883 1935 aa16.7■□□□□ 0.26
TPM4-205ENST00000586833 DDX60LQ5H9U9 1706 aaKnown RBP16.7■□□□□ 0.26
TPM4-205ENST00000586833 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 FOXP2O15409 715 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 ORC4O43929 436 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
TPM4-205ENST00000586833 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 CTDSPL2Q05D32 466 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
TPM4-205ENST00000586833 CCDC178Q5BJE1 867 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 NEDD1Q8NHV4 660 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 ESR2Q92731 530 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 NYAP2Q9P242 653 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 TMX2Q9Y320 296 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 DOCK1Q14185 1865 aa16.69■□□□□ 0.26
TPM4-205ENST00000586833 TTLL1O95922 423 aa16.68■□□□□ 0.26
TPM4-205ENST00000586833 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
TPM4-205ENST00000586833 TRDNQ13061 729 aa16.68■□□□□ 0.26
TPM4-205ENST00000586833 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
TPM4-205ENST00000586833 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
TPM4-205ENST00000586833 TREML2Q5T2D2 321 aa16.68■□□□□ 0.26
TPM4-205ENST00000586833 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
TPM4-205ENST00000586833 STAG1Q8WVM7 1258 aa16.68■□□□□ 0.26
TPM4-205ENST00000586833 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
TPM4-205ENST00000586833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 29.8
TPM4-205ENST00000586833 MYH1P12882 1939 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 RAD21O60216 631 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
TPM4-205ENST00000586833 FGRP09769 529 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 HAND2P61296 217 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 PKN2Q16513 984 aaKnown RBP16.67■□□□□ 0.26
TPM4-205ENST00000586833 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 KRT23Q9C075 422 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 EMILIN3Q9NT22 766 aa16.67■□□□□ 0.26
TPM4-205ENST00000586833 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 SMIM22K7EJ46 135 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 WDR46O15213 610 aaKnown RBP16.66■□□□□ 0.26
TPM4-205ENST00000586833 GNRH1P01148 92 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 CYP2C8P10632 490 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 VCAM1P19320 739 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 HOXD10P28358 340 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 FAM47AQ5JRC9 791 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 CTU1Q7Z7A3 348 aaKnown RBP16.66■□□□□ 0.26
TPM4-205ENST00000586833 IQCA1Q86XH1 822 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
TPM4-205ENST00000586833 MTMR4Q9NYA4 1195 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 CLIP2Q9UDT6 1046 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 CPA4Q9UI42 421 aa16.66■□□□□ 0.26
TPM4-205ENST00000586833 RNF20Q5VTR2 975 aa16.65■□□□□ 0.26
TPM4-205ENST00000586833 C17orf99Q6UX52 265 aa16.65■□□□□ 0.26
TPM4-205ENST00000586833 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
TPM4-205ENST00000586833 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
TPM4-205ENST00000586833 TANGO6Q9C0B7 1094 aa16.65■□□□□ 0.26
TPM4-205ENST00000586833 RPAP3Q9H6T3 665 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms