RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 LCORLQ8N3X6 602 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 CCDC17Q96LX7 622 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
ACTN4-209ENST00000586538 MBD4O95243 580 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 SLC34A2O95436 690 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
ACTN4-209ENST00000586538 SHMT1P34896 483 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 PLCD1P51178 756 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 ERVK-9P63128 1117 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 ERVK-24P63145 666 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 GABPAQ06546 454 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 C20orf194Q5TEA3 1177 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 U2AF1L4Q8WU68 220 aaKnown RBP13.53□□□□□ -0.24
ACTN4-209ENST00000586538 SDR42E1Q8WUS8 393 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 ARHGEF10LQ9HCE6 1279 aa13.53□□□□□ -0.24
ACTN4-209ENST00000586538 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
ACTN4-209ENST00000586538 MYH8P13535 1937 aa13.52□□□□□ -0.24
ACTN4-209ENST00000586538 SGPL1O95470 568 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 XRCC5P13010 732 aaKnown RBP13.52□□□□□ -0.25
ACTN4-209ENST00000586538 VCAM1P19320 739 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 RGS2P41220 211 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 ZYXQ15942 572 aaKnown RBP13.52□□□□□ -0.25
ACTN4-209ENST00000586538 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 LPAR1Q92633 364 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 P2RX7Q99572 595 aaKnown RBP13.52□□□□□ -0.25
ACTN4-209ENST00000586538 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 ZNF287Q9HBT7 754 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 IVNS1ABPQ9Y6Y0 642 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.25
ACTN4-209ENST00000586538 RPTORQ8N122 1335 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-209ENST00000586538 ELNP15502 786 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 GNAT2P19087 354 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 JAG1P78504 1218 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 CATSPERGQ6ZRH7 1159 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 ANKLE1Q8NAG6 615 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 PAGR1Q9BTK6 254 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 UNC93B1Q9H1C4 597 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 HMX1Q9NP08 348 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-209ENST00000586538 PAK6Q9NQU5 681 aaPredicted RBP13.51□□□□□ -0.25
ACTN4-209ENST00000586538 HOXC10Q9NYD6 342 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
ACTN4-209ENST00000586538 TFRCP02786 760 aaKnown RBP13.5□□□□□ -0.25
ACTN4-209ENST00000586538 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
ACTN4-209ENST00000586538 ICA1Q05084 483 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 AAMPQ13685 434 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 SEPT2Q15019 361 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 GIMAP6Q6P9H5 292 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 GPR142Q7Z601 462 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 PLEKHH3Q7Z736 793 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 KBTBD3Q8NAB2 608 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 SHISA4Q96DD7 197 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 EDC3Q96F86 508 aaKnown RBP13.5□□□□□ -0.25
ACTN4-209ENST00000586538 APBA2Q99767 749 aa13.5□□□□□ -0.25
ACTN4-209ENST00000586538 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.5□□□□□ -0.251e-7■■■■■ 28.5
ACTN4-209ENST00000586538 MKI67P46013 3256 aaKnown RBP13.49□□□□□ -0.25
ACTN4-209ENST00000586538 SMARCA5O60264 1052 aaPredicted RBP13.49□□□□□ -0.25
ACTN4-209ENST00000586538 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
ACTN4-209ENST00000586538 C12orf60Q5U649 245 aa13.49□□□□□ -0.25
ACTN4-209ENST00000586538 C16orf86Q6ZW13 317 aa13.49□□□□□ -0.25
ACTN4-209ENST00000586538 APPBP2Q92624 585 aa13.49□□□□□ -0.25
ACTN4-209ENST00000586538 DPF3Q92784 378 aa13.49□□□□□ -0.25
ACTN4-209ENST00000586538 DEFB118Q96PH6 123 aa13.49□□□□□ -0.25
ACTN4-209ENST00000586538 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
ACTN4-209ENST00000586538 RBPJLQ9UBG7 517 aa13.49□□□□□ -0.25
ACTN4-209ENST00000586538 GJD2Q9UKL4 321 aa13.49□□□□□ -0.25
ACTN4-209ENST00000586538 USP17L12C9JPN9 530 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 USP17L21D6R901 530 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 CYP2B6P20813 491 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 COG2Q14746 738 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 SHROOM1Q2M3G4 852 aaPredicted RBP13.48□□□□□ -0.25
ACTN4-209ENST00000586538 WDR78Q5VTH9 848 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 KANSL2Q9H9L4 492 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 TXNRD2Q9NNW7 524 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 SLC5A4Q9NY91 659 aa13.48□□□□□ -0.25
ACTN4-209ENST00000586538 SLC15A5A6NIM6 579 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 WDR46O15213 610 aaKnown RBP13.47□□□□□ -0.25
ACTN4-209ENST00000586538 RNF113AO15541 343 aaKnown RBP13.47□□□□□ -0.25
ACTN4-209ENST00000586538 CDK8P49336 464 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 NECAB2Q7Z6G3 386 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 CRISPLD2Q9H0B8 497 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 PUS7LQ9H0K6 701 aaKnown RBP13.47□□□□□ -0.25
ACTN4-209ENST00000586538 VCPKMTQ9H867 229 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 DOCK3Q8IZD9 2030 aa13.47□□□□□ -0.25
ACTN4-209ENST00000586538 BAZ2AQ9UIF9 1905 aaKnown RBP13.47□□□□□ -0.25
ACTN4-209ENST00000586538 SPDYE16A6NNV3 312 aaPredicted RBP13.46□□□□□ -0.25
ACTN4-209ENST00000586538 PRKAB2O43741 272 aa13.46□□□□□ -0.25
ACTN4-209ENST00000586538 STRNO43815 780 aa13.46□□□□□ -0.25
ACTN4-209ENST00000586538 MSCO60682 206 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms