RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 DEFB118Q96PH6 123 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 P2RX7Q99572 595 aaKnown RBP20.58■□□□□ 0.89
MBD3-204ENST00000585967 LRRCC1Q9C099 1032 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 KIAA1683Q9H0B3 1180 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 PAK6Q9NQU5 681 aaPredicted RBP20.58■□□□□ 0.89
MBD3-204ENST00000585967 SWAP70Q9UH65 585 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 ATP5JP18859 108 aa20.57■□□□□ 0.88
MBD3-204ENST00000585967 ERVK-9P63128 1117 aa20.57■□□□□ 0.88
MBD3-204ENST00000585967 ERVK-24P63145 666 aa20.57■□□□□ 0.88
MBD3-204ENST00000585967 GPATCH3Q96I76 525 aa20.57■□□□□ 0.88
MBD3-204ENST00000585967 PAGR1Q9BTK6 254 aa20.57■□□□□ 0.88
MBD3-204ENST00000585967 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.57■□□□□ 0.881e-7■■□□□ 14.5
MBD3-204ENST00000585967 HMX1Q9NP08 348 aaPredicted RBP20.57■□□□□ 0.88
MBD3-204ENST00000585967 FRMPD3Q5JV73 1810 aa20.56■□□□□ 0.88
MBD3-204ENST00000585967 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
MBD3-204ENST00000585967 JAG1P78504 1218 aa20.56■□□□□ 0.88
MBD3-204ENST00000585967 ZYXQ15942 572 aaKnown RBP20.56■□□□□ 0.88
MBD3-204ENST00000585967 SIRT2Q8IXJ6 389 aa20.56■□□□□ 0.88
MBD3-204ENST00000585967 ANKLE1Q8NAG6 615 aa20.56■□□□□ 0.88
MBD3-204ENST00000585967 EMILIN3Q9NT22 766 aa20.56■□□□□ 0.88
MBD3-204ENST00000585967 ATP8A2Q9NTI2 1148 aa20.56■□□□□ 0.88
MBD3-204ENST00000585967 RABGAP1Q9Y3P9 1069 aa20.56■□□□□ 0.88
MBD3-204ENST00000585967 RPTORQ8N122 1335 aa20.55■□□□□ 0.88
MBD3-204ENST00000585967 XRCC5P13010 732 aaKnown RBP20.55■□□□□ 0.88
MBD3-204ENST00000585967 SHMT1P34896 483 aa20.55■□□□□ 0.88
MBD3-204ENST00000585967 RGS2P41220 211 aa20.55■□□□□ 0.88
MBD3-204ENST00000585967 BOLA2Q9H3K6 86 aa20.55■□□□□ 0.88
MBD3-204ENST00000585967 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
MBD3-204ENST00000585967 ALPK3Q96L96 1907 aa20.55■□□□□ 0.88
MBD3-204ENST00000585967 H0YGN5 161 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 ZKSCAN1P17029 563 aaPredicted RBP20.54■□□□□ 0.88
MBD3-204ENST00000585967 VCAM1P19320 739 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 PLCD1P51178 756 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
MBD3-204ENST00000585967 UBE2Q1Q7Z7E8 422 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 HAUS7Q99871 368 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 DCP1AQ9NPI6 582 aaPredicted RBP20.54■□□□□ 0.88
MBD3-204ENST00000585967 GJD2Q9UKL4 321 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 IVNS1ABPQ9Y6Y0 642 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 PARP14Q460N5 1801 aa20.54■□□□□ 0.88
MBD3-204ENST00000585967 A0A0G2JMZ2 1700 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 TCRBV5S4A2TA0A5A2 114 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 ADD2P35612 726 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 UBE3CQ15386 1083 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 TMEM179Q6ZVK1 233 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 NECAB2Q7Z6G3 386 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 PLEKHH3Q7Z736 793 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 LCORLQ8N3X6 602 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 SDR42E1Q8WUS8 393 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 APBA2Q99767 749 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 RBPJLQ9UBG7 517 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 ZNF236Q9UL36 1845 aa20.53■□□□□ 0.88
MBD3-204ENST00000585967 MBD4O95243 580 aa20.52■□□□□ 0.88
MBD3-204ENST00000585967 CYP2B6P20813 491 aa20.52■□□□□ 0.88
MBD3-204ENST00000585967 GABPAQ06546 454 aa20.52■□□□□ 0.88
MBD3-204ENST00000585967 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
MBD3-204ENST00000585967 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
MBD3-204ENST00000585967 ARMT1Q9H993 441 aa20.52■□□□□ 0.88
MBD3-204ENST00000585967 TXNRD2Q9NNW7 524 aa20.52■□□□□ 0.88
MBD3-204ENST00000585967 EVI5O60447 810 aa20.51■□□□□ 0.87
MBD3-204ENST00000585967 LRRFIP1Q32MZ4 808 aaKnown RBP20.51■□□□□ 0.87
MBD3-204ENST00000585967 WDR78Q5VTH9 848 aa20.51■□□□□ 0.87
MBD3-204ENST00000585967 LBX2Q6XYB7 198 aa20.51■□□□□ 0.87
MBD3-204ENST00000585967 CATSPERGQ6ZRH7 1159 aa20.51■□□□□ 0.87
MBD3-204ENST00000585967 TRIB2Q92519 343 aa20.51■□□□□ 0.87
MBD3-204ENST00000585967 RPAP3Q9H6T3 665 aaPredicted RBP20.51■□□□□ 0.87
MBD3-204ENST00000585967 PRKAR2AP13861 404 aaKnown RBP20.5■□□□□ 0.87
MBD3-204ENST00000585967 SEPT2Q15019 361 aa20.5■□□□□ 0.87
MBD3-204ENST00000585967 LPAR1Q92633 364 aa20.5■□□□□ 0.87
MBD3-204ENST00000585967 CCDC17Q96LX7 622 aa20.5■□□□□ 0.87
MBD3-204ENST00000585967 TANGO6Q9C0B7 1094 aa20.5■□□□□ 0.87
MBD3-204ENST00000585967 ECHDC1Q9NTX5 307 aa20.5■□□□□ 0.87
MBD3-204ENST00000585967 COLQQ9Y215 455 aaPredicted RBP20.5■□□□□ 0.87
MBD3-204ENST00000585967 MYH4Q9Y623 1939 aa20.5■□□□□ 0.87
MBD3-204ENST00000585967 COL11A1P12107 1806 aaPredicted RBP20.5■□□□□ 0.87
MBD3-204ENST00000585967 EDC3Q96F86 508 aaKnown RBP20.49■□□□□ 0.87
MBD3-204ENST00000585967 HOXC10Q9NYD6 342 aa20.49■□□□□ 0.87
MBD3-204ENST00000585967 RLFQ13129 1914 aa20.49■□□□□ 0.87
MBD3-204ENST00000585967 ZNFX1Q9P2E3 1918 aaKnown RBP20.49■□□□□ 0.87
MBD3-204ENST00000585967 ICA1Q05084 483 aa20.48■□□□□ 0.87
MBD3-204ENST00000585967 CHRDL2Q6WN34 429 aa20.48■□□□□ 0.87
MBD3-204ENST00000585967 MB21D1Q8N884 522 aa20.48■□□□□ 0.87
MBD3-204ENST00000585967 ACER1Q8TDN7 264 aa20.48■□□□□ 0.87
MBD3-204ENST00000585967 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
MBD3-204ENST00000585967 PORCNQ9H237 461 aa20.48■□□□□ 0.87
MBD3-204ENST00000585967 ARPP21Q9UBL0 812 aaPredicted RBP20.48■□□□□ 0.87
MBD3-204ENST00000585967 SLC15A5A6NIM6 579 aa20.47■□□□□ 0.87
MBD3-204ENST00000585967 MAP2K5Q13163 448 aa20.47■□□□□ 0.87
MBD3-204ENST00000585967 COG2Q14746 738 aa20.47■□□□□ 0.87
MBD3-204ENST00000585967 MORN1Q5T089 497 aa20.47■□□□□ 0.87
MBD3-204ENST00000585967 MAP3K21Q5TCX8 1036 aa20.47■□□□□ 0.87
MBD3-204ENST00000585967 MFSD14CQ5VZR4 134 aa20.47■□□□□ 0.87
MBD3-204ENST00000585967 PAWRQ96IZ0 340 aaKnown RBP20.47■□□□□ 0.87
MBD3-204ENST00000585967 SLC4A4Q9Y6R1 1079 aa20.47■□□□□ 0.87
MBD3-204ENST00000585967 SPDYE16A6NNV3 312 aaPredicted RBP20.46■□□□□ 0.87
MBD3-204ENST00000585967 Q3C1V9 767 aa20.46■□□□□ 0.87
MBD3-204ENST00000585967 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
MBD3-204ENST00000585967 GREB1LQ9C091 1923 aaPredicted RBP20.45■□□□□ 0.86
MBD3-204ENST00000585967 ZFYP08048 801 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms