RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 TMEM2Q9UHN6 1383 aa7.45□□□□□ -1.22
CRLF3-206ENST00000585268 ARHGAP23Q9P227 1491 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 NFICP08651 508 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 MFAP1P55081 439 aaKnown RBP7.44□□□□□ -1.22
CRLF3-206ENST00000585268 TRIM26Q12899 539 aaPredicted RBP7.44□□□□□ -1.22
CRLF3-206ENST00000585268 NFKBIBQ15653 356 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 CCDC85BQ15834 202 aaPredicted RBP7.44□□□□□ -1.22
CRLF3-206ENST00000585268 PAOXQ6QHF9 649 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 GIPC2Q8TF65 315 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 CRELD1Q96HD1 420 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 MFSD14AQ96MC6 490 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 ATXN3LQ9H3M9 355 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 DISC1Q9NRI5 854 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 CYP8B1Q9UNU6 501 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 EID1Q9Y6B2 187 aa7.44□□□□□ -1.22
CRLF3-206ENST00000585268 NPHP4O75161 1426 aaPredicted RBP7.44□□□□□ -1.22
CRLF3-206ENST00000585268 SLIT1O75093 1534 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 NEURL4Q96JN8 1562 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 SORBS3O60504 671 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 ST13P50502 369 aaKnown RBP7.43□□□□□ -1.22
CRLF3-206ENST00000585268 LRRC14Q15048 493 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 ZC3H12AQ5D1E8 599 aaKnown RBP7.43□□□□□ -1.22
CRLF3-206ENST00000585268 TTBK2Q6IQ55 1244 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 SHKBP1Q8TBC3 707 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 GAL3ST3Q96A11 431 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 PRKAG2Q9UGJ0 569 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 ZNF335Q9H4Z2 1342 aaPredicted RBP7.43□□□□□ -1.22
CRLF3-206ENST00000585268 UBR1Q8IWV7 1749 aa7.43□□□□□ -1.22
CRLF3-206ENST00000585268 SCAF11Q99590 1463 aaKnown RBP7.43□□□□□ -1.22
CRLF3-206ENST00000585268 ADGRB3O60242 1522 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
CRLF3-206ENST00000585268 TGFB1P01137 390 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 MAP7Q14244 749 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 TTLL4Q14679 1199 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 TAF1CQ15572 869 aaPredicted RBP7.42□□□□□ -1.22
CRLF3-206ENST00000585268 SCARA3Q6AZY7 606 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 SEZ6L2Q6UXD5 910 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 SHISA5Q8N114 240 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 GATA6Q92908 595 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 MRS2Q9HD23 443 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 VTI1BQ9UEU0 232 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 DAGLAQ9Y4D2 1042 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 USP31Q70CQ4 1352 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 RIMS2Q9UQ26 1411 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 MED14O60244 1454 aa7.42□□□□□ -1.22
CRLF3-206ENST00000585268 PRR19A6NJB7 356 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 F13BP05160 661 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 NEFMP07197 916 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 ADMP35318 185 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 RPS26P62854 115 aaKnown RBP7.41□□□□□ -1.22
CRLF3-206ENST00000585268 ERVK-24P63145 666 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 PTPN11Q06124 597 aaPredicted RBP7.41□□□□□ -1.22
CRLF3-206ENST00000585268 ZNF326Q5BKZ1 582 aaKnown RBP7.41□□□□□ -1.22
CRLF3-206ENST00000585268 ZAR1Q86SH2 424 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 SLC26A8Q96RN1 970 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 PIDD1Q9HB75 910 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 ZFYVE9O95405 1425 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 TRPM2O94759 1503 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 TMEM131LA2VDJ0 1609 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 CLTCL1P53675 1640 aa7.41□□□□□ -1.22
CRLF3-206ENST00000585268 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 WDR64B1ANS9 1081 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 HCLS1P14317 486 aaPredicted RBP7.4□□□□□ -1.22
CRLF3-206ENST00000585268 LIG3P49916 1009 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 LRP8Q14114 963 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 ARTNQ5T4W7 220 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 FBXL6Q8N531 539 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.4□□□□□ -1.22
CRLF3-206ENST00000585268 TBC1D32Q96NH3 1257 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 NOC4LQ9BVI4 516 aaKnown RBP7.4□□□□□ -1.22
CRLF3-206ENST00000585268 C1GALT1Q9NS00 363 aa7.4□□□□□ -1.22
CRLF3-206ENST00000585268 SPHKAPQ2M3C7 1700 aa7.4□□□□□ -1.23
CRLF3-206ENST00000585268 CCDC144AA2RUR9 1427 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 ANKRD30BQ9BXX2 1392 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 DCDC2CA8MYV0 355 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 NTF4P34130 210 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 RING1Q06587 406 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
CRLF3-206ENST00000585268 MAP3K11Q16584 847 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 RGL3Q3MIN7 710 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 AGMOQ6ZNB7 445 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 SMYD4Q8IYR2 804 aaPredicted RBP7.39□□□□□ -1.23
CRLF3-206ENST00000585268 RNF214Q8ND24 703 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 PCDHA4Q9UN74 947 aa7.39□□□□□ -1.23
CRLF3-206ENST00000585268 KDM5AP29375 1690 aaKnown RBP7.38□□□□□ -1.23
CRLF3-206ENST00000585268 LTBP4Q8N2S1 1624 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 PLEKHG1Q9ULL1 1385 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 ZNF16P17020 682 aaPredicted RBP7.38□□□□□ -1.23
CRLF3-206ENST00000585268 CD97P48960 835 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 PPM1JQ5JR12 505 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.38□□□□□ -1.23
CRLF3-206ENST00000585268 ISL2Q96A47 359 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 LGR6Q9HBX8 967 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 PCDHB5Q9Y5E4 795 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 CSADQ9Y600 493 aa7.38□□□□□ -1.23
CRLF3-206ENST00000585268 POLR1AO95602 1720 aaPredicted RBP7.38□□□□□ -1.23
CRLF3-206ENST00000585268 FAM170BA6NMN3 283 aa7.37□□□□□ -1.23
CRLF3-206ENST00000585268 RNGTTO60942 597 aaKnown RBP7.37□□□□□ -1.23
CRLF3-206ENST00000585268 TFE3P19532 575 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms