RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SH3RF1Q7Z6J0 888 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 GTF3C2Q8WUA4 911 aaPredicted RBP22.29■■□□□ 1.16
TOP3A-220ENST00000585031 BADQ92934 168 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 SNRKQ9NRH2 765 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 SAP30BPQ9UHR5 308 aaKnown RBP22.29■■□□□ 1.16
TOP3A-220ENST00000585031 SMCHD1A6NHR9 2005 aa22.29■■□□□ 1.16
TOP3A-220ENST00000585031 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
TOP3A-220ENST00000585031 HOXC6P09630 235 aa22.28■■□□□ 1.16
TOP3A-220ENST00000585031 ANO1Q5XXA6 986 aa22.28■■□□□ 1.16
TOP3A-220ENST00000585031 SLC39A5Q6ZMH5 540 aa22.28■■□□□ 1.16
TOP3A-220ENST00000585031 CDCA7LQ96GN5 454 aa22.28■■□□□ 1.16
TOP3A-220ENST00000585031 LRP2BPQ9P2M1 347 aa22.28■■□□□ 1.16
TOP3A-220ENST00000585031 TMEM265A0A087WTH1 108 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 TRIM43BA6NCK2 446 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 E9PSI1 815 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 GH2P01242 217 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 CYBAP13498 195 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 GRB14Q14449 540 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 WDR78Q5VTH9 848 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 CRACR2BQ8N4Y2 399 aaPredicted RBP22.27■■□□□ 1.16
TOP3A-220ENST00000585031 TRIM43Q96BQ3 446 aaPredicted RBP22.27■■□□□ 1.16
TOP3A-220ENST00000585031 C12orf42Q96LP6 360 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 RAPGEFL1Q9UHV5 662 aa22.27■■□□□ 1.16
TOP3A-220ENST00000585031 ITGB8P26012 769 aa22.26■■□□□ 1.15
TOP3A-220ENST00000585031 DYNLL1P63167 89 aaKnown RBP22.26■■□□□ 1.15
TOP3A-220ENST00000585031 ATP2B2Q01814 1243 aa22.26■■□□□ 1.15
TOP3A-220ENST00000585031 CATSPERGQ6ZRH7 1159 aa22.26■■□□□ 1.15
TOP3A-220ENST00000585031 ACER1Q8TDN7 264 aa22.26■■□□□ 1.15
TOP3A-220ENST00000585031 CWC22Q9HCG8 908 aaKnown RBP22.26■■□□□ 1.15
TOP3A-220ENST00000585031 GINM1Q9NU53 330 aa22.26■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L15C9J2P7 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L13C9JLJ4 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L11C9JVI0 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L18D6R9N7 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L22D6RA61 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L17D6RBQ6 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L19D6RCP7 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L20D6RJB6 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP17L24Q0WX57 530 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 MTX1Q13505 466 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 SNX17Q15036 470 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 TRIM60Q495X7 471 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 GORABQ5T7V8 394 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 NAA16Q6N069 864 aaPredicted RBP22.25■■□□□ 1.15
TOP3A-220ENST00000585031 USP38Q8NB14 1042 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 PRDM5Q9NQX1 630 aaPredicted RBP22.25■■□□□ 1.15
TOP3A-220ENST00000585031 PDLIM7Q9NR12 457 aa22.25■■□□□ 1.15
TOP3A-220ENST00000585031 EPHB4P54760 987 aa22.24■■□□□ 1.15
TOP3A-220ENST00000585031 ZNFX1Q9P2E3 1918 aaKnown RBP22.23■■□□□ 1.15
TOP3A-220ENST00000585031 ANP32CO43423 234 aa22.23■■□□□ 1.15
TOP3A-220ENST00000585031 GLRX3O76003 335 aaKnown RBP22.23■■□□□ 1.15
TOP3A-220ENST00000585031 CYP2E1P05181 493 aaPredicted RBP22.23■■□□□ 1.15
TOP3A-220ENST00000585031 CCNA1P78396 465 aa22.23■■□□□ 1.15
TOP3A-220ENST00000585031 LBX2Q6XYB7 198 aa22.23■■□□□ 1.15
TOP3A-220ENST00000585031 ARRDC4Q8NCT1 418 aa22.23■■□□□ 1.15
TOP3A-220ENST00000585031 CHD9Q3L8U1 2897 aa22.23■■□□□ 1.15
TOP3A-220ENST00000585031 SPDYE16A6NNV3 312 aaPredicted RBP22.22■■□□□ 1.15
TOP3A-220ENST00000585031 BAG3O95817 575 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 VCAM1P19320 739 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 GRIN2CQ14957 1233 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 PRAMEF19Q5SWL8 479 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 C1orf53Q5VUE5 145 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 TATDN1Q6P1N9 297 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 NOL10Q9BSC4 688 aaKnown RBP22.22■■□□□ 1.15
TOP3A-220ENST00000585031 TRIM34Q9BYJ4 488 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 ZNF236Q9UL36 1845 aa22.22■■□□□ 1.15
TOP3A-220ENST00000585031 PNMA6EA0A0J9YXQ4 647 aa22.21■■□□□ 1.15
TOP3A-220ENST00000585031 PLCG2P16885 1265 aa22.21■■□□□ 1.15
TOP3A-220ENST00000585031 PLA2G5P39877 138 aa22.21■■□□□ 1.15
TOP3A-220ENST00000585031 ADCYAP1R1P41586 468 aa22.21■■□□□ 1.15
TOP3A-220ENST00000585031 FERMT2Q96AC1 680 aa22.21■■□□□ 1.15
TOP3A-220ENST00000585031 PIH1D3Q9NQM4 214 aaKnown RBP22.21■■□□□ 1.15
TOP3A-220ENST00000585031 REV3LO60673 3130 aa22.21■■□□□ 1.15
TOP3A-220ENST00000585031 MYO9BQ13459 2157 aa22.21■■□□□ 1.15
TOP3A-220ENST00000585031 COBLO75128 1261 aa22.2■■□□□ 1.14
TOP3A-220ENST00000585031 UQCRFS1P1P0C7P4 283 aa22.2■■□□□ 1.14
TOP3A-220ENST00000585031 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
TOP3A-220ENST00000585031 MIER1Q8N108 512 aa22.2■■□□□ 1.14
TOP3A-220ENST00000585031 HDAC5Q9UQL6 1122 aa22.2■■□□□ 1.14
TOP3A-220ENST00000585031 ADORA2AP29274 412 aa22.19■■□□□ 1.14
TOP3A-220ENST00000585031 GUCY1A2P33402 732 aa22.19■■□□□ 1.14
TOP3A-220ENST00000585031 FEZ1Q99689 392 aa22.19■■□□□ 1.14
TOP3A-220ENST00000585031 MOV10L1Q9BXT6 1211 aaKnown RBP22.19■■□□□ 1.14
TOP3A-220ENST00000585031 API5Q9BZZ5 524 aaKnown RBP22.19■■□□□ 1.14
TOP3A-220ENST00000585031 KIAA1683Q9H0B3 1180 aa22.19■■□□□ 1.14
TOP3A-220ENST00000585031 RPAP3Q9H6T3 665 aaPredicted RBP22.19■■□□□ 1.14
TOP3A-220ENST00000585031 IVNS1ABPQ9Y6Y0 642 aa22.19■■□□□ 1.14
TOP3A-220ENST00000585031 NCOR1O75376 2440 aa22.19■■□□□ 1.14
TOP3A-220ENST00000585031 MYCNP04198 464 aaPredicted RBP22.18■■□□□ 1.14
TOP3A-220ENST00000585031 TLE2Q04725 743 aa22.18■■□□□ 1.14
TOP3A-220ENST00000585031 RAB3GAP1Q15042 981 aa22.18■■□□□ 1.14
TOP3A-220ENST00000585031 LRRC41Q15345 812 aa22.18■■□□□ 1.14
TOP3A-220ENST00000585031 OLFML2BQ68BL8 750 aa22.18■■□□□ 1.14
TOP3A-220ENST00000585031 DBNDD2Q9BQY9 259 aa22.18■■□□□ 1.14
TOP3A-220ENST00000585031 A0A0G2JMZ2 1700 aa22.17■■□□□ 1.14
TOP3A-220ENST00000585031 BDP1A6H8Y1 2624 aa22.17■■□□□ 1.14
TOP3A-220ENST00000585031 KBTBD13C9JR72 458 aa22.17■■□□□ 1.14
TOP3A-220ENST00000585031 SEPT4O43236 478 aa22.17■■□□□ 1.14
TOP3A-220ENST00000585031 HLA-DOAP06340 250 aa22.17■■□□□ 1.14
TOP3A-220ENST00000585031 ZAP70P43403 619 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms