RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 DGKZQ13574 1117 aa19.4■□□□□ 0.7
ERBB2-222ENST00000584908 PKN2Q16513 984 aaKnown RBP19.4■□□□□ 0.7
ERBB2-222ENST00000584908 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
ERBB2-222ENST00000584908 USP17L2Q6R6M4 530 aa19.4■□□□□ 0.7
ERBB2-222ENST00000584908 ZNF589Q86UQ0 364 aaPredicted RBP19.4■□□□□ 0.7
ERBB2-222ENST00000584908 EMILIN3Q9NT22 766 aa19.4■□□□□ 0.7
ERBB2-222ENST00000584908 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
ERBB2-222ENST00000584908 PNMA3Q9UL41 463 aa19.4■□□□□ 0.7
ERBB2-222ENST00000584908 CCDC171Q6TFL3 1326 aa19.4■□□□□ 0.7
ERBB2-222ENST00000584908 RASA1P20936 1047 aa19.39■□□□□ 0.69
ERBB2-222ENST00000584908 USP14P54578 494 aa19.39■□□□□ 0.69
ERBB2-222ENST00000584908 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
ERBB2-222ENST00000584908 ACER1Q8TDN7 264 aa19.39■□□□□ 0.69
ERBB2-222ENST00000584908 ANAPC4Q9UJX5 808 aa19.39■□□□□ 0.69
ERBB2-222ENST00000584908 MGAMO43451 1857 aa19.39■□□□□ 0.69
ERBB2-222ENST00000584908 MPHOSPH10O00566 681 aaKnown RBP19.38■□□□□ 0.69
ERBB2-222ENST00000584908 HSPD1P10809 573 aaKnown RBP19.38■□□□□ 0.69
ERBB2-222ENST00000584908 PPARAQ07869 468 aa19.38■□□□□ 0.69
ERBB2-222ENST00000584908 SIAH1Q8IUQ4 282 aa19.38■□□□□ 0.69
ERBB2-222ENST00000584908 CD99L2Q8TCZ2 262 aa19.38■□□□□ 0.69
ERBB2-222ENST00000584908 ZNF287Q9HBT7 754 aa19.38■□□□□ 0.69
ERBB2-222ENST00000584908 DIAPH3Q9NSV4 1193 aa19.38■□□□□ 0.69
ERBB2-222ENST00000584908 ZSWIM8A7E2V4 1837 aa19.37■□□□□ 0.69
ERBB2-222ENST00000584908 A0A1W2PRG0 241 aa19.37■□□□□ 0.69
ERBB2-222ENST00000584908 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
ERBB2-222ENST00000584908 LACTBP83111 547 aaPredicted RBP19.37■□□□□ 0.69
ERBB2-222ENST00000584908 CAP1Q01518 475 aa19.37■□□□□ 0.69
ERBB2-222ENST00000584908 OTOP1Q7RTM1 612 aa19.37■□□□□ 0.69
ERBB2-222ENST00000584908 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.37■□□□□ 0.69
ERBB2-222ENST00000584908 ASCC2Q9H1I8 757 aaPredicted RBP19.37■□□□□ 0.69
ERBB2-222ENST00000584908 KANSL2Q9H9L4 492 aa19.37■□□□□ 0.69
ERBB2-222ENST00000584908 CPA4Q9UI42 421 aa19.37■□□□□ 0.69
ERBB2-222ENST00000584908 PLIN4Q96Q06 1357 aa19.36■□□□□ 0.69
ERBB2-222ENST00000584908 LAMA4Q16363 1823 aa19.36■□□□□ 0.69
ERBB2-222ENST00000584908 FGAP02671 866 aa19.36■□□□□ 0.69
ERBB2-222ENST00000584908 OSBPP22059 807 aa19.36■□□□□ 0.69
ERBB2-222ENST00000584908 CWC27Q6UX04 472 aaKnown RBP19.36■□□□□ 0.69
ERBB2-222ENST00000584908 FEZ1Q99689 392 aa19.36■□□□□ 0.69
ERBB2-222ENST00000584908 MKNK2Q9HBH9 465 aa19.36■□□□□ 0.69
ERBB2-222ENST00000584908 NEFLP07196 543 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 SLC3A2P08195 630 aaKnown RBP19.35■□□□□ 0.69
ERBB2-222ENST00000584908 FGRP09769 529 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 GCLCP48506 637 aaPredicted RBP19.35■□□□□ 0.69
ERBB2-222ENST00000584908 ICA1Q05084 483 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 PDE4BQ07343 736 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 ARHGEF6Q15052 776 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 SMCR8Q8TEV9 937 aaPredicted RBP19.35■□□□□ 0.69
ERBB2-222ENST00000584908 ABHD8Q96I13 439 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.35■□□□□ 0.69
ERBB2-222ENST00000584908 TMX2Q9Y320 296 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 MYH4Q9Y623 1939 aa19.35■□□□□ 0.69
ERBB2-222ENST00000584908 RLFQ13129 1914 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 IGKV6D-41A0A0C4DH26 115 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 GNRH1P01148 92 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 VCAM1P19320 739 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 IFFO2Q5TF58 517 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 FBXO46Q6PJ61 603 aaPredicted RBP19.34■□□□□ 0.69
ERBB2-222ENST00000584908 SH2D4AQ9H788 454 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 EFCC1Q9HA90 598 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 ARHGEF10LQ9HCE6 1279 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 TRIM17Q9Y577 477 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 PARP14Q460N5 1801 aa19.34■□□□□ 0.69
ERBB2-222ENST00000584908 RAD50Q92878 1312 aa19.33■□□□□ 0.69
ERBB2-222ENST00000584908 KIF22Q14807 665 aa19.33■□□□□ 0.69
ERBB2-222ENST00000584908 ZYXQ15942 572 aaKnown RBP19.33■□□□□ 0.69
ERBB2-222ENST00000584908 FAM110CQ1W6H9 321 aa19.33■□□□□ 0.69
ERBB2-222ENST00000584908 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.69
ERBB2-222ENST00000584908 CLEC10AQ8IUN9 316 aa19.33■□□□□ 0.69
ERBB2-222ENST00000584908 LPAR1Q92633 364 aa19.33■□□□□ 0.69
ERBB2-222ENST00000584908 CCDC136Q96JN2 1154 aa19.33■□□□□ 0.69
ERBB2-222ENST00000584908 USP17L15C9J2P7 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L13C9JLJ4 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L11C9JVI0 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L18D6R9N7 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L22D6RA61 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L17D6RBQ6 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L19D6RCP7 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L20D6RJB6 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 PRDM1O75626 825 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 EEF2P13639 858 aaKnown RBP19.32■□□□□ 0.68
ERBB2-222ENST00000584908 CHMLP26374 656 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 CTGFP29279 349 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 IRX3P78415 501 aaPredicted RBP19.32■□□□□ 0.68
ERBB2-222ENST00000584908 USP17L24Q0WX57 530 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 CATSPERGQ6ZRH7 1159 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 ZNF444Q8N0Y2 327 aaPredicted RBP19.32■□□□□ 0.68
ERBB2-222ENST00000584908 NEDD1Q8NHV4 660 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 P2RX7Q99572 595 aaKnown RBP19.32■□□□□ 0.68
ERBB2-222ENST00000584908 DSCC1Q9BVC3 393 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 ARHGAP39Q9C0H5 1083 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 VCPKMTQ9H867 229 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 NYAP2Q9P242 653 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 MORF4L1Q9UBU8 362 aa19.32■□□□□ 0.68
ERBB2-222ENST00000584908 ORC4O43929 436 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 HERVK_113P62684 666 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 CTDSPL2Q05D32 466 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 LBX2Q6XYB7 198 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 GTF3C2Q8WUA4 911 aaPredicted RBP19.31■□□□□ 0.68
ERBB2-222ENST00000584908 IL25Q9H293 177 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms