RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ERVK-24P63145 666 aa24.7■■□□□ 1.54
TOP3A-219ENST00000584887 EVX2Q03828 476 aa24.7■■□□□ 1.54
TOP3A-219ENST00000584887 SLFNL1Q499Z3 407 aa24.7■■□□□ 1.54
TOP3A-219ENST00000584887 UBE2Q1Q7Z7E8 422 aa24.7■■□□□ 1.54
TOP3A-219ENST00000584887 GTF3C2Q8WUA4 911 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-219ENST00000584887 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.7■■□□□ 1.54
TOP3A-219ENST00000584887 PAK6Q9NQU5 681 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-219ENST00000584887 COLQQ9Y215 455 aaPredicted RBP24.7■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L15C9J2P7 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L13C9JLJ4 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L11C9JVI0 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L18D6R9N7 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L22D6RA61 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L17D6RBQ6 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L19D6RCP7 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L20D6RJB6 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 SMARCA5O60264 1052 aaPredicted RBP24.69■■□□□ 1.54
TOP3A-219ENST00000584887 ATP5JP18859 108 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 MAPK4P31152 587 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 USP17L24Q0WX57 530 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 TRIM32Q13049 653 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 C12orf42Q96LP6 360 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 NUDT12Q9BQG2 462 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 LRRCC1Q9C099 1032 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 KIAA1683Q9H0B3 1180 aa24.69■■□□□ 1.54
TOP3A-219ENST00000584887 DCP1AQ9NPI6 582 aaPredicted RBP24.69■■□□□ 1.54
TOP3A-219ENST00000584887 TRIOBPQ9H2D6 2365 aa24.68■■□□□ 1.54
TOP3A-219ENST00000584887 VCAM1P19320 739 aa24.68■■□□□ 1.54
TOP3A-219ENST00000584887 SEPT2Q15019 361 aa24.68■■□□□ 1.54
TOP3A-219ENST00000584887 Q3C1V9 767 aa24.68■■□□□ 1.54
TOP3A-219ENST00000584887 SOCS4Q8WXH5 440 aa24.68■■□□□ 1.54
TOP3A-219ENST00000584887 HAUS7Q99871 368 aa24.68■■□□□ 1.54
TOP3A-219ENST00000584887 PORCNQ9H237 461 aa24.68■■□□□ 1.54
TOP3A-219ENST00000584887 PRKAB2O43741 272 aa24.67■■□□□ 1.54
TOP3A-219ENST00000584887 ADD2P35612 726 aa24.67■■□□□ 1.54
TOP3A-219ENST00000584887 GABPAQ06546 454 aa24.67■■□□□ 1.54
TOP3A-219ENST00000584887 WDR78Q5VTH9 848 aa24.67■■□□□ 1.54
TOP3A-219ENST00000584887 SLC44A5Q8NCS7 719 aa24.67■■□□□ 1.54
TOP3A-219ENST00000584887 TRIB2Q92519 343 aa24.67■■□□□ 1.54
TOP3A-219ENST00000584887 GUCY1A2P33402 732 aa24.66■■□□□ 1.54
TOP3A-219ENST00000584887 RPAP3Q9H6T3 665 aaPredicted RBP24.66■■□□□ 1.54
TOP3A-219ENST00000584887 HMX1Q9NP08 348 aaPredicted RBP24.66■■□□□ 1.54
TOP3A-219ENST00000584887 PLXNB2O15031 1838 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 ZKSCAN1P17029 563 aaPredicted RBP24.65■■□□□ 1.54
TOP3A-219ENST00000584887 POTEEQ6S8J3 1075 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 CHRDL2Q6WN34 429 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 GPR142Q7Z601 462 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 PLEKHH3Q7Z736 793 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 DYNLL2Q96FJ2 89 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 CRISPLD2Q9H0B8 497 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 RABGAP1Q9Y3P9 1069 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 NR2E3Q9Y5X4 410 aa24.65■■□□□ 1.54
TOP3A-219ENST00000584887 RPTORQ8N122 1335 aa24.64■■□□□ 1.54
TOP3A-219ENST00000584887 CHGBP05060 677 aa24.64■■□□□ 1.54
TOP3A-219ENST00000584887 PRKAR2AP13861 404 aaKnown RBP24.64■■□□□ 1.54
TOP3A-219ENST00000584887 CCNA1P78396 465 aa24.64■■□□□ 1.54
TOP3A-219ENST00000584887 CATSPERGQ6ZRH7 1159 aa24.64■■□□□ 1.54
TOP3A-219ENST00000584887 DIS3LQ8TF46 1054 aaKnown RBP24.64■■□□□ 1.54
TOP3A-219ENST00000584887 RGS2P41220 211 aa24.63■■□□□ 1.53
TOP3A-219ENST00000584887 AMOTL1Q8IY63 956 aa24.63■■□□□ 1.53
TOP3A-219ENST00000584887 DDRGK1Q96HY6 314 aa24.63■■□□□ 1.53
TOP3A-219ENST00000584887 PAWRQ96IZ0 340 aaKnown RBP24.63■■□□□ 1.53
TOP3A-219ENST00000584887 CYP2D7A0A087X1C5 515 aa24.62■■□□□ 1.53
TOP3A-219ENST00000584887 EVI5O60447 810 aa24.62■■□□□ 1.53
TOP3A-219ENST00000584887 CNMDO75829 334 aa24.62■■□□□ 1.53
TOP3A-219ENST00000584887 CAPN2P17655 700 aa24.62■■□□□ 1.53
TOP3A-219ENST00000584887 TANGO6Q9C0B7 1094 aa24.62■■□□□ 1.53
TOP3A-219ENST00000584887 ATP8A2Q9NTI2 1148 aa24.62■■□□□ 1.53
TOP3A-219ENST00000584887 SWAP70Q9UH65 585 aa24.62■■□□□ 1.53
TOP3A-219ENST00000584887 BAZ2AQ9UIF9 1905 aaKnown RBP24.61■■□□□ 1.53
TOP3A-219ENST00000584887 XRCC5P13010 732 aaKnown RBP24.61■■□□□ 1.53
TOP3A-219ENST00000584887 UBE3CQ15386 1083 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 CCL14Q16627 93 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 ZSCAN25Q6NSZ9 544 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 TMEM179Q6ZVK1 233 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 NECAB2Q7Z6G3 386 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 CLEC10AQ8IUN9 316 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 TRMT44Q8IYL2 757 aaKnown RBP24.61■■□□□ 1.53
TOP3A-219ENST00000584887 APBA2Q99767 749 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 PCDH10Q9P2E7 1040 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 SLC4A4Q9Y6R1 1079 aa24.61■■□□□ 1.53
TOP3A-219ENST00000584887 A0A1W2PRG0 241 aa24.6■■□□□ 1.53
TOP3A-219ENST00000584887 SPDYE16A6NNV3 312 aaPredicted RBP24.6■■□□□ 1.53
TOP3A-219ENST00000584887 GLRX3O76003 335 aaKnown RBP24.6■■□□□ 1.53
TOP3A-219ENST00000584887 MORN1Q5T089 497 aa24.6■■□□□ 1.53
TOP3A-219ENST00000584887 ECHDC1Q9NTX5 307 aa24.6■■□□□ 1.53
TOP3A-219ENST00000584887 MYH7P12883 1935 aa24.6■■□□□ 1.53
TOP3A-219ENST00000584887 USP17L12C9JPN9 530 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 USP17L21D6R901 530 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 AKR1B1P15121 316 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 FXR1P51114 621 aaKnown RBP eCLIP24.59■■□□□ 1.53
TOP3A-219ENST00000584887 USP6NLQ92738 828 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 GPATCH3Q96I76 525 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 BTBD7Q9P203 1132 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 IVNS1ABPQ9Y6Y0 642 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 MYH8P13535 1937 aa24.59■■□□□ 1.53
TOP3A-219ENST00000584887 SMIM22K7EJ46 135 aa24.58■■□□□ 1.53
TOP3A-219ENST00000584887 ICA1Q05084 483 aa24.58■■□□□ 1.53
TOP3A-219ENST00000584887 MAP2K5Q13163 448 aa24.58■■□□□ 1.53
TOP3A-219ENST00000584887 MAP3K21Q5TCX8 1036 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms