RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 ME3Q16798 604 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 APOA5Q6Q788 366 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 NFXL1Q6ZNB6 911 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 SENP2Q9HC62 589 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CABP5Q9NP86 173 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 MTMR4Q9NYA4 1195 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZNF112Q9UJU3 913 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 PFKFB2O60825 505 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 TTLL1O95922 423 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GH2P01242 217 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ASNSP08243 561 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 NF2P35240 595 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CUL4AQ13619 759 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 PRAMEF18Q5VWM3 479 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 USP48Q86UV5 1035 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZNF654Q8IZM8 581 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZNF526Q8TF50 670 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GTF3C6Q969F1 213 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GLIS2Q9BZE0 524 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 KANSL2Q9H9L4 492 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 BRPF3Q9ULD4 1205 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CLEC11AQ9Y240 323 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 SLC12A7Q9Y666 1083 aa19.59■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CTNND1O60716 968 aaKnown RBP19.58■□□□□ 0.72
CDK5RAP3-230ENST00000584042 TOP1P11387 765 aaKnown RBP19.58■□□□□ 0.72
CDK5RAP3-230ENST00000584042 GUCY1A2P33402 732 aa19.58■□□□□ 0.72
CDK5RAP3-230ENST00000584042 ICA1Q05084 483 aa19.58■□□□□ 0.72
CDK5RAP3-230ENST00000584042 LARP6Q9BRS8 491 aaKnown RBP19.58■□□□□ 0.72
CDK5RAP3-230ENST00000584042 NYAP2Q9P242 653 aa19.58■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SYNPO2Q9UMS6 1093 aa19.58■□□□□ 0.72
CDK5RAP3-230ENST00000584042 ZBTB43O43298 467 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 PDIA3P30101 505 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 ST3GAL1Q11201 340 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SEPT2Q15019 361 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SHROOM1Q2M3G4 852 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SYNE3Q6ZMZ3 975 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CATIPQ7Z7H3 387 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 MICU3Q86XE3 530 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CHMP4CQ96CF2 233 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 KLRG1Q96E93 195 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 WRNIP1Q96S55 665 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 TMEM47Q9BQJ4 181 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SLKQ9H2G2 1235 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 KAT14Q9H8E8 782 aa19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 DAXXQ9UER7 740 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-230ENST00000584042 PHIPQ8WWQ0 1821 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 PPP1R12BO60237 982 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CALM1P0DP23 149 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CALM2P0DP24 149 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CALM3P0DP25 149 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 MAP1SQ66K74 1059 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CLEC10AQ8IUN9 316 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SCYL3Q8IZE3 742 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 PNMA1Q8ND90 353 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 INTS4Q96HW7 963 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 HPS5Q9UPZ3 1129 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 TRPM7Q96QT4 1865 aa19.56■□□□□ 0.72
CDK5RAP3-230ENST00000584042 GOLGA8AA7E2F4 631 aa19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 METAP2P50579 478 aaKnown RBP eCLIP19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 JAG1P78504 1218 aa19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 TROAPQ12815 778 aa19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 MAP3K11Q16584 847 aa19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 MAP3K14Q99558 947 aa19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 GPBP1L1Q9HC44 474 aaPredicted RBP19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 NAP1L2Q9ULW6 460 aaPredicted RBP19.55■□□□□ 0.72
CDK5RAP3-230ENST00000584042 INPP5BP32019 993 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 IREB2P48200 963 aaKnown RBP19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SCRN1Q12765 414 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 STK3Q13188 491 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 RAB3GAP1Q15042 981 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 PPP2R5BQ15173 497 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CCDC83Q8IWF9 413 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 MKL1Q969V6 931 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 MYL10Q9BUA6 226 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SH2D4AQ9H788 454 aa19.54■□□□□ 0.72
CDK5RAP3-230ENST00000584042 DHX16O60231 1041 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 USP2O75604 605 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 EEF2P13639 858 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 RTN1Q16799 776 aa19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CHADLQ6NUI6 762 aa19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 DLK2Q6UY11 383 aa19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 LRRC47Q8N1G4 583 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 NECAB1Q8N987 351 aa19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 ARHGEF10LQ9HCE6 1279 aa19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CCDC196A0A1B0GTZ2 297 aa19.52■□□□□ 0.72
CDK5RAP3-230ENST00000584042 HSP90AA1P07900 732 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP3-230ENST00000584042 GRM4Q14833 912 aa19.52■□□□□ 0.72
CDK5RAP3-230ENST00000584042 NUP133Q8WUM0 1156 aa19.52■□□□□ 0.72
CDK5RAP3-230ENST00000584042 LLPHQ9BRT6 129 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP3-230ENST00000584042 CLIP2Q9UDT6 1046 aa19.52■□□□□ 0.72
CDK5RAP3-230ENST00000584042 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-230ENST00000584042 SNHG28P0DPA3 235 aa19.51■□□□□ 0.71
CDK5RAP3-230ENST00000584042 RXRAP19793 462 aa19.51■□□□□ 0.71
CDK5RAP3-230ENST00000584042 KIF5BP33176 963 aa19.51■□□□□ 0.71
CDK5RAP3-230ENST00000584042 RAB11FIP4Q86YS3 637 aa19.51■□□□□ 0.71
CDK5RAP3-230ENST00000584042 SIAH1Q8IUQ4 282 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms