RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 USP44Q9H0E7 712 aa14.14□□□□□ -0.15
NUP85-224ENST00000583948 DENND2AQ9ULE3 1009 aa14.14□□□□□ -0.15
NUP85-224ENST00000583948 SMCHD1A6NHR9 2005 aa14.14□□□□□ -0.15
NUP85-224ENST00000583948 GPR75-ASB3A0A0A6YYF3 556 aa14.13□□□□□ -0.15
NUP85-224ENST00000583948 CYBAP13498 195 aa14.13□□□□□ -0.15
NUP85-224ENST00000583948 IGFBP4P22692 258 aa14.13□□□□□ -0.15
NUP85-224ENST00000583948 PTPREP23469 700 aa14.13□□□□□ -0.15
NUP85-224ENST00000583948 TRMT44Q8IYL2 757 aaKnown RBP14.13□□□□□ -0.15
NUP85-224ENST00000583948 SH3RF3Q8TEJ3 882 aaPredicted RBP14.13□□□□□ -0.15
NUP85-224ENST00000583948 TIFAQ96CG3 184 aa14.13□□□□□ -0.15
NUP85-224ENST00000583948 WDR18Q9BV38 432 aa14.13□□□□□ -0.15
NUP85-224ENST00000583948 THEGQ9P2T0 379 aa14.13□□□□□ -0.15
NUP85-224ENST00000583948 FAM47AQ5JRC9 791 aa14.12□□□□□ -0.15
NUP85-224ENST00000583948 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
NUP85-224ENST00000583948 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
NUP85-224ENST00000583948 KHSRPQ92945 711 aaKnown RBP eCLIP14.12□□□□□ -0.15
NUP85-224ENST00000583948 LENG1Q96BZ8 264 aaPredicted RBP14.12□□□□□ -0.15
NUP85-224ENST00000583948 CRBNQ96SW2 442 aa14.12□□□□□ -0.15
NUP85-224ENST00000583948 FAM86C2PA6NEL3 165 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 KBTBD13C9JR72 458 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 PQBP1O60828 265 aaKnown RBP14.11□□□□□ -0.15
NUP85-224ENST00000583948 KCNQ1P51787 676 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 SNX17Q15036 470 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 LRRC41Q15345 812 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 MICALL1Q8N3F8 863 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 EXOC6Q8TAG9 804 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 ATXN2LQ8WWM7 1075 aaKnown RBP14.11□□□□□ -0.15
NUP85-224ENST00000583948 FAM163AQ96GL9 167 aaPredicted RBP14.11□□□□□ -0.15
NUP85-224ENST00000583948 CDK5RAP2Q96SN8 1893 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.11□□□□□ -0.151e-8■■□□□ 13.5
NUP85-224ENST00000583948 LRFN3Q9BTN0 628 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 PBX4Q9BYU1 374 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 AS3MTQ9HBK9 375 aa14.11□□□□□ -0.15
NUP85-224ENST00000583948 GNL3LQ9NVN8 582 aaKnown RBP14.11□□□□□ -0.15
NUP85-224ENST00000583948 SAP30BPQ9UHR5 308 aaKnown RBP14.11□□□□□ -0.15
NUP85-224ENST00000583948 GBF1Q92538 1859 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 USP17L10C9JJH3 530 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 IGHA2P01877 340 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
NUP85-224ENST00000583948 MRPS5P82675 430 aaKnown RBP14.1□□□□□ -0.15
NUP85-224ENST00000583948 ALDH1L2Q3SY69 923 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 C16orf59Q7L2K0 433 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 ALYREFQ86V81 257 aaKnown RBP14.1□□□□□ -0.15
NUP85-224ENST00000583948 MAPKAPK5Q8IW41 473 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 TEX11Q8IYF3 940 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 CEP126Q9P2H0 1117 aa14.1□□□□□ -0.15
NUP85-224ENST00000583948 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.09□□□□□ -0.15
NUP85-224ENST00000583948 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.09□□□□□ -0.15
NUP85-224ENST00000583948 SLC15A5A6NIM6 579 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 RBAK-RBAKDNI3L0D1 243 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 COBLO75128 1261 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 ACRP10323 421 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 RAG1P15918 1043 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 CCDC129Q6ZRS4 1044 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 ERICH6Q7L0X2 663 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 ACER1Q8TDN7 264 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 PALD1Q9ULE6 856 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 ZBTB21Q9ULJ3 1066 aa14.09□□□□□ -0.15
NUP85-224ENST00000583948 PGK1P00558 417 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 CLTBP09497 229 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 BMP1P13497 986 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 FPGSQ05932 587 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 GRB14Q14449 540 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 ZKSCAN2Q63HK3 967 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 ARRDC4Q8NCT1 418 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 TGFBRAP1Q8WUH2 860 aa14.08□□□□□ -0.16
NUP85-224ENST00000583948 NSUN4Q96CB9 384 aaKnown RBP14.08□□□□□ -0.16
NUP85-224ENST00000583948 GAS2L1Q99501 681 aaPredicted RBP14.08□□□□□ -0.16
NUP85-224ENST00000583948 GH2P01242 217 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 TAL1P17542 331 aaPredicted RBP14.07□□□□□ -0.16
NUP85-224ENST00000583948 ADORA2AP29274 412 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 FAAP100Q0VG06 881 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 ADGRA1Q86SQ6 560 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 DPP9Q86TI2 863 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
NUP85-224ENST00000583948 MRPL50Q8N5N7 158 aaKnown RBP14.07□□□□□ -0.16
NUP85-224ENST00000583948 NKX2-4Q9H2Z4 354 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 TMEM39AQ9NV64 488 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 AATFQ9NY61 560 aaKnown RBP eCLIP14.07□□□□□ -0.16
NUP85-224ENST00000583948 RAI14Q9P0K7 980 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 HMG20BQ9P0W2 317 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 NOB1Q9ULX3 412 aaKnown RBP14.07□□□□□ -0.16
NUP85-224ENST00000583948 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 RABGAP1Q9Y3P9 1069 aa14.07□□□□□ -0.16
NUP85-224ENST00000583948 MYO5AQ9Y4I1 1855 aaKnown RBP14.07□□□□□ -0.16
NUP85-224ENST00000583948 C19orf81C9J6K1 198 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 RFXAPO00287 272 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 SEMA3EO15041 775 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 MSCO60682 206 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 ASNSP08243 561 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 HOXC6P09630 235 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 USP17L2Q6R6M4 530 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 PANK1Q8TE04 598 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 XAGE2Q96GT9 111 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 C11orf16Q9NQ32 467 aa14.06□□□□□ -0.16
NUP85-224ENST00000583948 YBX2Q9Y2T7 364 aaKnown RBP14.06□□□□□ -0.16
NUP85-224ENST00000583948 TACC3Q9Y6A5 838 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms