RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 RGS2P41220 211 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 MAGEA10P43363 369 aaPredicted RBP16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP5P45974 858 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 PLCD1P51178 756 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 CEP85Q6P2H3 762 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
CCDC57-218ENST00000583593 RABGAP1Q9Y3P9 1069 aa16.43■□□□□ 0.22
CCDC57-218ENST00000583593 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
CCDC57-218ENST00000583593 SHMT1P34896 483 aa16.42■□□□□ 0.22
CCDC57-218ENST00000583593 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
CCDC57-218ENST00000583593 APBA2Q99767 749 aa16.42■□□□□ 0.22
CCDC57-218ENST00000583593 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
CCDC57-218ENST00000583593 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
CCDC57-218ENST00000583593 VCAM1P19320 739 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 EVX2Q03828 476 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 MAP2K5Q13163 448 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 LRRC26Q2I0M4 334 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 CERKLQ49MI3 558 aaPredicted RBP16.41■□□□□ 0.22
CCDC57-218ENST00000583593 TTC6Q86TZ1 520 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 CERS3Q8IU89 383 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 CCAR1Q8IX12 1150 aaKnown RBP16.41■□□□□ 0.22
CCDC57-218ENST00000583593 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
CCDC57-218ENST00000583593 EDC3Q96F86 508 aaKnown RBP16.41■□□□□ 0.22
CCDC57-218ENST00000583593 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
CCDC57-218ENST00000583593 NAV1Q8NEY1 1877 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 PTPREP23469 700 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 USP14P54578 494 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 GABPAQ06546 454 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 ABCB5Q2M3G0 1257 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 LRIT3Q3SXY7 679 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 GPR153Q6NV75 609 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 TDHQ8IZJ6 230 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 FEZ1Q99689 392 aa16.4■□□□□ 0.22
CCDC57-218ENST00000583593 RLFQ13129 1914 aa16.39■□□□□ 0.21
CCDC57-218ENST00000583593 SPDYE16A6NNV3 312 aaPredicted RBP16.39■□□□□ 0.21
CCDC57-218ENST00000583593 IGHA2P01877 340 aa16.39■□□□□ 0.21
CCDC57-218ENST00000583593 AACSQ86V21 672 aa16.39■□□□□ 0.21
CCDC57-218ENST00000583593 SLC17A8Q8NDX2 589 aa16.39■□□□□ 0.21
CCDC57-218ENST00000583593 NPLOC4Q8TAT6 608 aa16.39■□□□□ 0.21
CCDC57-218ENST00000583593 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
CCDC57-218ENST00000583593 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
CCDC57-218ENST00000583593 CCNA1P78396 465 aa16.38■□□□□ 0.21
CCDC57-218ENST00000583593 GRB14Q14449 540 aa16.38■□□□□ 0.21
CCDC57-218ENST00000583593 TMED8Q6PL24 325 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-218ENST00000583593 Q7L0L9 218 aa16.38■□□□□ 0.21
CCDC57-218ENST00000583593 RPAP3Q9H6T3 665 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-218ENST00000583593 IL1RAPL2Q9NP60 686 aa16.38■□□□□ 0.21
CCDC57-218ENST00000583593 CABP5Q9NP86 173 aa16.38■□□□□ 0.21
CCDC57-218ENST00000583593 MAGEB6P1A0A0J9YX57 407 aa16.37■□□□□ 0.21
CCDC57-218ENST00000583593 HOXC6P09630 235 aa16.37■□□□□ 0.21
CCDC57-218ENST00000583593 SEPT2Q15019 361 aa16.37■□□□□ 0.21
CCDC57-218ENST00000583593 DEFB123Q8N688 67 aa16.37■□□□□ 0.21
CCDC57-218ENST00000583593 UBE2OQ9C0C9 1292 aaKnown RBP16.37■□□□□ 0.21
CCDC57-218ENST00000583593 CWC22Q9HCG8 908 aaKnown RBP16.37■□□□□ 0.21
CCDC57-218ENST00000583593 UNC80Q8N2C7 3258 aa16.37■□□□□ 0.21
CCDC57-218ENST00000583593 A0A0G2JMZ2 1700 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 DLL1O00548 723 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 GLRX3O76003 335 aaKnown RBP16.36■□□□□ 0.21
CCDC57-218ENST00000583593 PDE6AP16499 860 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 WDR78Q5VTH9 848 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 MFSD14CQ5VZR4 134 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 ERC1Q8IUD2 1116 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 TRPV1Q8NER1 839 aa16.36■□□□□ 0.21
CCDC57-218ENST00000583593 DDX20Q9UHI6 824 aaKnown RBP16.36■□□□□ 0.21
CCDC57-218ENST00000583593 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 TCRBV5S4A2TA0A5A2 114 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-218ENST00000583593 CYP2C19P33261 490 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCDC57-218ENST00000583593 MDM2Q00987 491 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-218ENST00000583593 SLC9C2Q5TAH2 1124 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 PANK1Q8TE04 598 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-218ENST00000583593 MTMR10Q9NXD2 777 aa16.35■□□□□ 0.21
CCDC57-218ENST00000583593 CYP2D6P10635 497 aa16.34■□□□□ 0.21
CCDC57-218ENST00000583593 ATP2B2Q01814 1243 aa16.34■□□□□ 0.21
CCDC57-218ENST00000583593 TTF1Q15361 905 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-218ENST00000583593 SIAH1Q8IUQ4 282 aa16.34■□□□□ 0.21
CCDC57-218ENST00000583593 LPAR1Q92633 364 aa16.34■□□□□ 0.21
CCDC57-218ENST00000583593 MOV10L1Q9BXT6 1211 aaKnown RBP16.34■□□□□ 0.21
CCDC57-218ENST00000583593 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-218ENST00000583593 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms