RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 CYP2E1P05181 493 aaPredicted RBP11.74□□□□□ -0.53
MKS1-212ENST00000583577 GSPT1P15170 499 aaKnown RBP11.74□□□□□ -0.53
MKS1-212ENST00000583577 TIMM10P62072 90 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 TCP10Q12799 353 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 FAM110CQ1W6H9 321 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 GORABQ5T7V8 394 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 MAP3K21Q5TCX8 1036 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 TDRD7Q8NHU6 1098 aaKnown RBP11.74□□□□□ -0.53
MKS1-212ENST00000583577 PPP1R9BQ96SB3 815 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
MKS1-212ENST00000583577 PRDM5Q9NQX1 630 aaPredicted RBP11.74□□□□□ -0.53
MKS1-212ENST00000583577 GNL3LQ9NVN8 582 aaKnown RBP11.74□□□□□ -0.53
MKS1-212ENST00000583577 SLC45A1Q9Y2W3 748 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
MKS1-212ENST00000583577 DOCK2Q92608 1830 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 SPTBN4Q9H254 2564 aa11.74□□□□□ -0.53
MKS1-212ENST00000583577 APBB1O00213 710 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
MKS1-212ENST00000583577 CCND3P30281 292 aaPredicted RBP11.73□□□□□ -0.53
MKS1-212ENST00000583577 RTP1P59025 263 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
MKS1-212ENST00000583577 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 CCDC85BQ15834 202 aaPredicted RBP11.73□□□□□ -0.53
MKS1-212ENST00000583577 TNNI3KQ59H18 835 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 FKBP1CQ5VVH2 108 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 LHX8Q68G74 356 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 RHPN1Q8TCX5 695 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 BADQ92934 168 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 KIF1BPQ96EK5 621 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
MKS1-212ENST00000583577 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
MKS1-212ENST00000583577 ATP11BQ9Y2G3 1177 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 MYO5AQ9Y4I1 1855 aaKnown RBP11.73□□□□□ -0.53
MKS1-212ENST00000583577 FPGT-TNNI3KV9GXZ4 949 aa11.73□□□□□ -0.53
MKS1-212ENST00000583577 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
MKS1-212ENST00000583577 MBD3O95983 291 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 ADORA1P30542 326 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 TERF1P54274 439 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
MKS1-212ENST00000583577 CACNB2Q08289 660 aaPredicted RBP11.72□□□□□ -0.53
MKS1-212ENST00000583577 FAM151AQ8WW52 585 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 RNPC3Q96LT9 517 aaKnown RBP11.72□□□□□ -0.53
MKS1-212ENST00000583577 ZDHHC15Q96MV8 337 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 GAS2L1Q99501 681 aaPredicted RBP11.72□□□□□ -0.53
MKS1-212ENST00000583577 EPHX3Q9H6B9 360 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 AFG3L2Q9Y4W6 797 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.72□□□□□ -0.53
MKS1-212ENST00000583577 TRANK1O15050 2925 aa11.72□□□□□ -0.53
MKS1-212ENST00000583577 TRIM75PA6NK02 468 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 ESPNB1AK53 854 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 PTPRAP18433 802 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 SDSP20132 328 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 PHKA1P46020 1223 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 TREML2Q5T2D2 321 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 CCDC102BQ68D86 513 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
MKS1-212ENST00000583577 CLASRPQ8N2M8 674 aaKnown RBP11.71□□□□□ -0.53
MKS1-212ENST00000583577 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 ZNF576Q9H609 170 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
MKS1-212ENST00000583577 SEMA3EO15041 775 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
MKS1-212ENST00000583577 DNAJB2P25686 324 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 TMEM31Q5JXX7 168 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 CCDC158Q5M9N0 1113 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 SCYL3Q8IZE3 742 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 IL1RAPL2Q9NP60 686 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 DENND2AQ9ULE3 1009 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 DDX49Q9Y6V7 483 aaKnown RBP11.7□□□□□ -0.54
MKS1-212ENST00000583577 BRWD1Q9NSI6 2320 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 MYH7P12883 1935 aa11.7□□□□□ -0.54
MKS1-212ENST00000583577 CFAP54Q96N23 3096 aa11.69□□□□□ -0.54
MKS1-212ENST00000583577 IFIT2P09913 472 aaKnown RBP11.69□□□□□ -0.54
MKS1-212ENST00000583577 UQCRFS1P1P0C7P4 283 aa11.69□□□□□ -0.54
MKS1-212ENST00000583577 MCM5P33992 734 aa11.69□□□□□ -0.54
MKS1-212ENST00000583577 GCLCP48506 637 aaPredicted RBP11.69□□□□□ -0.54
MKS1-212ENST00000583577 CCDC84Q86UT8 332 aaPredicted RBP11.69□□□□□ -0.54
MKS1-212ENST00000583577 AACSQ86V21 672 aa11.69□□□□□ -0.54
MKS1-212ENST00000583577 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
MKS1-212ENST00000583577 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
MKS1-212ENST00000583577 NUDT12Q9BQG2 462 aa11.69□□□□□ -0.54
MKS1-212ENST00000583577 DBNDD2Q9BQY9 259 aa11.69□□□□□ -0.54
MKS1-212ENST00000583577 CCDC8Q9H0W5 538 aaPredicted RBP11.69□□□□□ -0.54
MKS1-212ENST00000583577 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.69□□□□□ -0.54
MKS1-212ENST00000583577 PRRC2BQ5JSZ5 2229 aaKnown RBP11.69□□□□□ -0.54
MKS1-212ENST00000583577 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 ZBTB22O15209 634 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
MKS1-212ENST00000583577 PDE1AP54750 535 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 CUL4AQ13619 759 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 CCL14Q16627 93 aa11.68□□□□□ -0.54
MKS1-212ENST00000583577 AKNAD1Q5T1N1 836 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms