RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 AK9Q5TCS8 1911 aa10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 EN2P19622 333 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 USP4Q13107 963 aa10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 PKN2Q16513 984 aaKnown RBP10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 CCDC27Q2M243 656 aa10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 ARMC9Q7Z3E5 817 aa10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 TRIM17Q9Y577 477 aa10.04□□□□□ -0.8
PPP4R1-225ENST00000583438 HSP90B1P14625 803 aaKnown RBP10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 CTGFP29279 349 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 ADD1P35611 737 aaKnown RBP10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 GYG1P46976 350 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 CACNB3P54284 484 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 CLDN10P78369 228 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 NEXNQ0ZGT2 675 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 SREBF2Q12772 1141 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 FKBP5Q13451 457 aaPredicted RBP10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 RASA3Q14644 834 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 DLGAP5Q15398 846 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 BRI3BPQ8WY22 251 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 ITPKCQ96DU7 683 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 ARHGAP39Q9C0H5 1083 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 TMEM39BQ9GZU3 492 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 ANKRD2Q9GZV1 360 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 TDRD3Q9H7E2 651 aaKnown RBP10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 PTPN22Q9Y2R2 807 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 MYH2Q9UKX2 1941 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 FAM205AQ6ZU69 1335 aa10.03□□□□□ -0.8
PPP4R1-225ENST00000583438 ANKRD18BA2A2Z9 1011 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 MANSC4A6NHS7 340 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 ZBTB48P10074 688 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 NF2P35240 595 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 WDR4P57081 412 aaKnown RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 CRTC2Q53ET0 693 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 FAM43AQ8N2R8 423 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 TDRD7Q8NHU6 1098 aaKnown RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 ARMC5Q96C12 935 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 OPTNQ96CV9 577 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 SUCLG2Q96I99 432 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 FAM84BQ96KN1 310 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 MPHOSPH8Q99549 860 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 STK31Q9BXU1 1019 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 OSBPL3Q9H4L5 887 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 ELP3Q9H9T3 547 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 ZNF70Q9UC06 446 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 IQSEC3Q9UPP2 1182 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 PCDHGA11Q9Y5H2 935 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 IL16Q14005 1332 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 CDK5RAP2Q96SN8 1893 aa10.02□□□□□ -0.81
PPP4R1-225ENST00000583438 SIPA1L1O43166 1804 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 ATAD5Q96QE3 1844 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 ZBTB7BO15156 539 aaPredicted RBP10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 PLIN1O60240 522 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 ATG7O95352 703 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 ZIC2O95409 532 aaPredicted RBP10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 MYCP01106 439 aaPredicted RBP10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 TIMP2P16035 220 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 RASA1P20936 1047 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 CBLBQ13191 982 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 VGLL4Q14135 290 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 HABP4Q5JVS0 413 aaKnown RBP10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 ANKRD44Q8N8A2 993 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 VGLL2Q8N8G2 317 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 KIAA1024Q9UPX6 916 aa10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 MYO5AQ9Y4I1 1855 aaKnown RBP10.01□□□□□ -0.81
PPP4R1-225ENST00000583438 PLXNB2O15031 1838 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 DOCK1Q14185 1865 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L15C9J2P7 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L10C9JJH3 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L13C9JLJ4 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L12C9JPN9 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L11C9JVI0 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L21D6R901 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L18D6R9N7 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L22D6RA61 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L17D6RBQ6 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L19D6RCP7 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L20D6RJB6 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 NBPF7P0C2Y1 421 aaPredicted RBP10□□□□□ -0.81
PPP4R1-225ENST00000583438 KCNJ4P48050 445 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
PPP4R1-225ENST00000583438 FKBP1AP62942 108 aaKnown RBP10□□□□□ -0.81
PPP4R1-225ENST00000583438 USP17L24Q0WX57 530 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 PTK7Q13308 1070 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 LRRC24Q50LG9 513 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 MFSD14BQ5SR56 506 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 TRIM50Q86XT4 487 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10□□□□□ -0.81
PPP4R1-225ENST00000583438 KLHDC4Q8TBB5 520 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 ZNF333Q96JL9 665 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 CHMP3Q9Y3E7 222 aa10□□□□□ -0.81
PPP4R1-225ENST00000583438 RIPOR2Q9Y4F9 1068 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms