RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 LRRC2Q9BYS8 371 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 AGXT2Q9BYV1 514 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 IQCA1Q86XH1 822 aa19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 SNX21Q969T3 373 aa19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 CDCA5Q96FF9 252 aa19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ZSCAN10Q96SZ4 725 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ZKSCAN3Q9BRR0 538 aa19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ZNF341Q9BYN7 854 aa19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 IL17RBQ9NRM6 502 aa19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ZNF112Q9UJU3 913 aa19.24■□□□□ 0.67
CDK5RAP3-228ENST00000583363 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 SH2B2O14492 632 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 IFIT3O14879 490 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 CD2BP2O95400 341 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 AK2P54819 239 aa19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 TOB2Q14106 344 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 SEC23AQ15436 765 aa19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 CCDC178Q5BJE1 867 aa19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 C2orf69Q8N8R5 385 aa19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ANKS1AQ92625 1134 aa19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 UBAC1Q9BSL1 405 aa19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 GPHNQ9NQX3 736 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-228ENST00000583363 NMT2O60551 498 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 USP2O75604 605 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 CAP2P40123 477 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 LIFRP42702 1097 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 NOVP48745 357 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 JAG1P78504 1218 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 SART3Q15020 963 aaKnown RBP19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ANKRD1Q15327 319 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ABCB5Q2M3G0 1257 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 TMEM67Q5HYA8 995 aa19.22■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ERICH2A1L162 156 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 MPHOSPH10O00566 681 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 GDF11O95390 407 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 GUCY1A2P33402 732 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 MCM2P49736 904 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 FGD1P98174 961 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 KIF23Q02241 960 aaPredicted RBP19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 DGKHQ86XP1 1220 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 TMTC2Q8N394 836 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ENAHQ8N8S7 591 aaPredicted RBP19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 LY9Q9HBG7 655 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 CABP5Q9NP86 173 aa19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ANGEL1Q9UNK9 670 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP3-228ENST00000583363 PLIN4Q96Q06 1357 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SSC5DA1L4H1 1573 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TNRC18O15417 2968 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 CTNND1O60716 968 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 GH2P01242 217 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 NF2P35240 595 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ZNF157P51786 506 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 EVCP57679 992 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 WTAPQ15007 396 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SHROOM1Q2M3G4 852 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 RCSD1Q6JBY9 416 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TMEM179Q6ZVK1 233 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 BRF1Q92994 677 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 CCDC102AQ96A19 550 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 LARP6Q9BRS8 491 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SENP2Q9HC62 589 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 GINM1Q9NU53 330 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TNKSO95271 1327 aa19.2■□□□□ 0.66
CDK5RAP3-228ENST00000583363 PPP1R12BO60237 982 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SGMS1Q86VZ5 419 aa19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 KANSL2Q9H9L4 492 aa19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SAGE1Q9NXZ1 904 aa19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 MTMR4Q9NYA4 1195 aa19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 FZD1Q9UP38 647 aa19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 LIMCH1Q9UPQ0 1083 aa19.19■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SLC10A3P09131 477 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 INPP5BP32019 993 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 APOBRQ0VD83 1088 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 PRKG1Q13976 671 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SEPT2Q15019 361 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 IFIT1BQ5T764 474 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 SIAH1Q8IUQ4 282 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TBC1D2Q9BYX2 928 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 RNF186Q9NXI6 227 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 BRPF3Q9ULD4 1205 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ZBTB21Q9ULJ3 1066 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TPCN1Q9ULQ1 816 aa19.18■□□□□ 0.66
CDK5RAP3-228ENST00000583363 MYH8P13535 1937 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TRPA1O75762 1119 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ASNSP08243 561 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 MAP3K11Q16584 847 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 PPP4R3BQ5MIZ7 849 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 ZSCAN31Q96LW9 406 aaPredicted RBP19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 WRNIP1Q96S55 665 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TMEM47Q9BQJ4 181 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 NYAP2Q9P242 653 aa19.17■□□□□ 0.66
CDK5RAP3-228ENST00000583363 CCDC69A6NI79 296 aa19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 TTLL1O95922 423 aa19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 IREB2P48200 963 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-228ENST00000583363 RAB3GAP1Q15042 981 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms