RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 MAGEB6Q8N7X4 407 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 MIGA1Q8NAN2 632 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 EAF2Q96CJ1 260 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 C12orf42Q96LP6 360 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 APBA2Q99767 749 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 EHD4Q9H223 541 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 SERPINB13Q9UIV8 391 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SOX1O00570 391 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 GLRX3O76003 335 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP14P54578 494 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CCNA1P78396 465 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MAP3K12Q12852 859 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MORN1Q5T089 497 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 TATDN1Q6P1N9 297 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 USP6NLQ92738 828 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 GDF15Q99988 308 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 PORCNQ9H237 461 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CABP5Q9NP86 173 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 RABGAP1Q9Y3P9 1069 aa11.77□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MKI67P46013 3256 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SYN1P17600 705 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CACNB2Q08289 660 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 ABCB5Q2M3G0 1257 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CERKLQ49MI3 558 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 AACSQ86V21 672 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 LRCH3Q96II8 777 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 ANTXR1Q9H6X2 564 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 NDUFB9Q9Y6M9 179 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CENPFP49454 3210 aa11.76□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CCND3P30281 292 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CCL14Q16627 93 aa11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 WDR78Q5VTH9 848 aa11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CEP85Q6P2H3 762 aa11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 PFASO15067 1338 aa11.75□□□□□ -0.53
CDK5RAP3-227ENST00000583352 BRCA2P51587 3418 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CNMDO75829 334 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 COL6A1P12109 1028 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 VCAM1P19320 739 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MAGEA10P43363 369 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MFSD14CQ5VZR4 134 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 LHX8Q68G74 356 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SKAP1Q86WV1 359 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CHMP4BQ9H444 224 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 EXOC6BQ9Y2D4 811 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 IVNS1ABPQ9Y6Y0 642 aa11.74□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MAGEB6P1A0A0J9YX57 407 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 PTPREP23469 700 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SHMT1P34896 483 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 LBX2Q6XYB7 198 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 TDHQ8IZJ6 230 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SLC17A8Q8NDX2 589 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 ACER1Q8TDN7 264 aa11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 RIOK1Q9BRS2 568 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 RPAP3Q9H6T3 665 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-227ENST00000583352 NAV1Q8NEY1 1877 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 PLCD1P51178 756 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 ATP2B2Q01814 1243 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 SEPT2Q15019 361 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 LRIT3Q3SXY7 679 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 IL1RAPL2Q9NP60 686 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 BTBD7Q9P203 1132 aa11.72□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 MSCO60682 206 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 HOXC6P09630 235 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 PDE6AP16499 860 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 CNGA1P29973 690 aa11.71□□□□□ -0.53
CDK5RAP3-227ENST00000583352 GUCY1A2P33402 732 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms