RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 FAM47AQ5JRC9 791 aa8.76□□□□□ -1.01
CTC1-211ENST00000583254 WWC1Q8IX03 1113 aa8.76□□□□□ -1.01
CTC1-211ENST00000583254 SLF2Q8IX21 1173 aa8.76□□□□□ -1.01
CTC1-211ENST00000583254 MICALL1Q8N3F8 863 aa8.76□□□□□ -1.01
CTC1-211ENST00000583254 ZGPATQ8N5A5 531 aaKnown RBP8.76□□□□□ -1.01
CTC1-211ENST00000583254 FAM163AQ96GL9 167 aaPredicted RBP8.76□□□□□ -1.01
CTC1-211ENST00000583254 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.76□□□□□ -1.01
CTC1-211ENST00000583254 CXXC1Q9P0U4 656 aaPredicted RBP8.76□□□□□ -1.01
CTC1-211ENST00000583254 RABGAP1Q9Y3P9 1069 aa8.76□□□□□ -1.01
CTC1-211ENST00000583254 IVNS1ABPQ9Y6Y0 642 aa8.76□□□□□ -1.01
CTC1-211ENST00000583254 MUC6Q6W4X9 2439 aa8.76□□□□□ -1.01
CTC1-211ENST00000583254 GPR75-ASB3A0A0A6YYF3 556 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 SEMA3EO15041 775 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 SEPT4O43236 478 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 NPM3O75607 178 aaKnown RBP8.75□□□□□ -1.01
CTC1-211ENST00000583254 IGHA2P01877 340 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 ASNSP08243 561 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 ADORA1P30542 326 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 EXOSC9Q06265 439 aaKnown RBP8.75□□□□□ -1.01
CTC1-211ENST00000583254 RASGRF1Q13972 1273 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 ATG9AQ7Z3C6 839 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 ZNF384Q8TF68 577 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 EMILIN3Q9NT22 766 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 TMEM39AQ9NV64 488 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 HERC5Q9UII4 1024 aaKnown RBP8.75□□□□□ -1.01
CTC1-211ENST00000583254 IL16Q14005 1332 aa8.75□□□□□ -1.01
CTC1-211ENST00000583254 CDK5RAP2Q96SN8 1893 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 RFX5P48382 616 aaPredicted RBP8.74□□□□□ -1.01
CTC1-211ENST00000583254 MECOMQ03112 1051 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 ZYXQ15942 572 aaKnown RBP8.74□□□□□ -1.01
CTC1-211ENST00000583254 CCDC27Q2M243 656 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 PRAMEF19Q5SWL8 479 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 USP17L2Q6R6M4 530 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 SIL1Q9H173 461 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
CTC1-211ENST00000583254 NKX2-4Q9H2Z4 354 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 DNAJC18Q9H819 358 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 BTBD7Q9P203 1132 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 ZBTB21Q9ULJ3 1066 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 PHF24Q9UPV7 400 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 TRANK1O15050 2925 aa8.74□□□□□ -1.01
CTC1-211ENST00000583254 A0A1W2PQ45 241 aaPredicted RBP8.73□□□□□ -1.01
CTC1-211ENST00000583254 A0A1W2PQY0 241 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 ADORA2AP29274 412 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 MRE11P49959 708 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 FAAP100Q0VG06 881 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 SKIV2LQ15477 1246 aaKnown RBP8.73□□□□□ -1.01
CTC1-211ENST00000583254 TMEM240Q5SV17 173 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 OLFML2BQ68BL8 750 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 SPTY2D1Q68D10 685 aaPredicted RBP8.73□□□□□ -1.01
CTC1-211ENST00000583254 CCDC102BQ68D86 513 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 DPP9Q86TI2 863 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 TEX11Q8IYF3 940 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 SLC44A5Q8NCS7 719 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 KHSRPQ92945 711 aaKnown RBP eCLIP8.73□□□□□ -1.01
CTC1-211ENST00000583254 SMCHD1A6NHR9 2005 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 FOCADQ5VW36 1801 aa8.73□□□□□ -1.01
CTC1-211ENST00000583254 A0A0G2JMZ2 1700 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 SPDYE16A6NNV3 312 aaPredicted RBP8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L15C9J2P7 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L13C9JLJ4 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L11C9JVI0 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L18D6R9N7 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L22D6RA61 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L17D6RBQ6 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L19D6RCP7 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L20D6RJB6 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 GPR37L1O60883 481 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 PGK1P00558 417 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 ACRP10323 421 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 USP17L24Q0WX57 530 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 PPIGQ13427 754 aaKnown RBP eCLIP8.72□□□□□ -1.015e-6■■■□□ 15.6
CTC1-211ENST00000583254 AAK1Q2M2I8 961 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 RASIP1Q5U651 963 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 C16orf59Q7L2K0 433 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 C12orf42Q96LP6 360 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 FEZ1Q99689 392 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 XPNPEP3Q9NQH7 507 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 CEP126Q9P2H0 1117 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 PI4KBQ9UBF8 816 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 MSRAQ9UJ68 235 aa8.72□□□□□ -1.01
CTC1-211ENST00000583254 YBX2Q9Y2T7 364 aaKnown RBP8.72□□□□□ -1.01
CTC1-211ENST00000583254 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
CTC1-211ENST00000583254 WDFY4Q6ZS81 3184 aa8.71□□□□□ -1.01
CTC1-211ENST00000583254 APBB1O00213 710 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 COBLO75128 1261 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 TIMP1P01033 207 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 RARBP10826 455 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 VCAM1P19320 739 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 DDX10Q13206 875 aaKnown RBP8.71□□□□□ -1.02
CTC1-211ENST00000583254 RAB30Q15771 203 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 MFSD5Q6N075 450 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 PI16Q6UXB8 463 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 CATSPERGQ6ZRH7 1159 aa8.71□□□□□ -1.02
CTC1-211ENST00000583254 CRACR2BQ8N4Y2 399 aaPredicted RBP8.71□□□□□ -1.02
CTC1-211ENST00000583254 SH3RF3Q8TEJ3 882 aaPredicted RBP8.71□□□□□ -1.02
CTC1-211ENST00000583254 LENG1Q96BZ8 264 aaPredicted RBP8.71□□□□□ -1.02
CTC1-211ENST00000583254 TRIM34Q9BYJ4 488 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms