RNA–Protein interactions for RNA: ENST00000582406.1

BPTF-215, Transcript of bromodomain PHD finger transcription factor, human

TSL 3

Gene BPTF, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BPTF-215	ENST00000582406	PPP1R13L	Q8WUF5	828 aa		4.9	□□□□□ -1.63
BPTF-215	ENST00000582406	CCDC74B	Q96LY2	380 aa		4.9	□□□□□ -1.63
BPTF-215	ENST00000582406	KLHL3	Q9UH77	587 aa		4.9	□□□□□ -1.63
BPTF-215	ENST00000582406	PLAGL2	Q9UPG8	496 aa		4.9	□□□□□ -1.63
BPTF-215	ENST00000582406		U3KQE9	123 aa		4.9	□□□□□ -1.63
BPTF-215	ENST00000582406	UPK3BL1	B0FP48	263 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	CHURC1-FNTB	B4DL54	471 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	UPK3BL2	E5RIL1	263 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	RGS13	O14921	159 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	MCM4	P33991	863 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	CCNF	P41002	786 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	RBM25	P49756	843 aa	Known RBP	4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	CLC	Q05315	142 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	RAD51AP2	Q09MP3	1159 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	PAK2	Q13177	524 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	NKPD1	Q17RQ9	610 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	NFXL1	Q6ZNB6	911 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	GK5	Q6ZS86	529 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	SPACA3	Q8IXA5	215 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	MFSD4A	Q8N468	514 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	PIWIL2	Q8TC59	973 aa	Known RBP	4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	TMEM40	Q8WWA1	233 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	ZNF428	Q96B54	188 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	GPRASP2	Q96D09	838 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	HRASLS5	Q96KN8	279 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	CNNM2	Q9H8M5	875 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	ZNRF3	Q9ULT6	936 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406	SLC5A6	Q9Y289	635 aa		4.89	□□□□□ -1.63
BPTF-215	ENST00000582406		E9PSI1	815 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	ADAMTS4	O75173	837 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	ITIH2	P19823	946 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	SOX9	P48436	509 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	GP2	P55259	537 aa	Known RBP	4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	C9orf131	Q5VYM1	1079 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	OVOS1	Q6IE37	1185 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	THAP5	Q7Z6K1	395 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	CDH24	Q86UP0	819 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	AGBL5	Q8NDL9	886 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	RNF141	Q8WVD5	230 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	ASPN	Q9BXN1	380 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	CCSER2	Q9H7U1	834 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	CAPN6	Q9Y6Q1	641 aa		4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	COL17A1	Q9UMD9	1497 aa	Predicted RBP	4.88	□□□□□ -1.63
BPTF-215	ENST00000582406	FAM155A	B1AL88	458 aa	Predicted RBP	4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	TNFRSF10C	O14798	259 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	RAG1	P15918	1043 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	AOC3	Q16853	763 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	ARSH	Q5FYA8	562 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	XP32	Q5T750	250 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	INTS3	Q68E01	1043 aa	Known RBP	4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	NLRC3	Q7RTR2	1065 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	PHACTR4	Q8IZ21	702 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	TAB3	Q8N5C8	712 aa	Predicted RBP	4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	FLCN	Q8NFG4	579 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	ASB11	Q8WXH4	323 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	ATG4C	Q96DT6	458 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	FERD3L	Q96RJ6	166 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	KIF2C	Q99661	725 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	PAK6	Q9NQU5	681 aa	Predicted RBP	4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	IGSF5	Q9NSI5	407 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	PITPNM2	Q9BZ72	1349 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	CNTNAP4	Q9C0A0	1308 aa		4.87	□□□□□ -1.63
BPTF-215	ENST00000582406	PRR33	A8MZF0	331 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	NME1	P15531	152 aa	Known RBP	4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	ERCC5	P28715	1186 aa	Predicted RBP	4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	GBP1	P32455	592 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	TNNI2	P48788	182 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	RNF4	P78317	190 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	WFDC3	Q8IUB2	231 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	SEC16B	Q96JE7	1060 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	KREMEN1	Q96MU8	473 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	TM9SF2	Q99805	663 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	GINM1	Q9NU53	330 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	KCNH3	Q9ULD8	1083 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	ST14	Q9Y5Y6	855 aa		4.86	□□□□□ -1.63
BPTF-215	ENST00000582406	UBOX5	O94941	541 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	CBX7	O95931	251 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	FUT4	P22083	530 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	CHMP4BP1	P59074	171 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	TNK2	Q07912	1038 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	ANGEL2	Q5VTE6	544 aa	Known RBP	4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	SPRED2	Q7Z698	418 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	TP53INP2	Q8IXH6	220 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	VWCE	Q96DN2	955 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406		Q96M66	194 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	HSPA12B	Q96MM6	686 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	ACBD3	Q9H3P7	528 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	SEMA3G	Q9NS98	782 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	LMCD1	Q9NZU5	365 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	STRIP2	Q9ULQ0	834 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	EFR3B	Q9Y2G0	817 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	INPP5F	Q9Y2H2	1132 aa		4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	OAS3	Q9Y6K5	1087 aa	Known RBP	4.85	□□□□□ -1.63
BPTF-215	ENST00000582406	CD8B	P10966	210 aa		4.84	□□□□□ -1.63
BPTF-215	ENST00000582406	SRF	P11831	508 aa		4.84	□□□□□ -1.63
BPTF-215	ENST00000582406	BNIP3	Q12983	259 aa		4.84	□□□□□ -1.63

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