RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 BTDP43251 543 aa26.17■■□□□ 1.78
CCDC47-204ENST00000582252 LARGE2Q8N3Y3 721 aa26.17■■□□□ 1.78
CCDC47-204ENST00000582252 CTCFLQ8NI51 663 aaPredicted RBP26.17■■□□□ 1.78
CCDC47-204ENST00000582252 FBXW7Q969H0 707 aa26.17■■□□□ 1.78
CCDC47-204ENST00000582252 FOXP1Q9H334 677 aaPredicted RBP26.17■■□□□ 1.78
CCDC47-204ENST00000582252 ZNF277Q9NRM2 450 aaPredicted RBP26.17■■□□□ 1.78
CCDC47-204ENST00000582252 SLC39A14Q15043 492 aa26.16■■□□□ 1.78
CCDC47-204ENST00000582252 STRIP1Q5VSL9 837 aa26.16■■□□□ 1.78
CCDC47-204ENST00000582252 FAM200AQ8TCP9 573 aa26.16■■□□□ 1.78
CCDC47-204ENST00000582252 LTBP3Q9NS15 1303 aa26.15■■□□□ 1.78
CCDC47-204ENST00000582252 PRPF3O43395 683 aaKnown RBP26.15■■□□□ 1.78
CCDC47-204ENST00000582252 PPP6R2O75170 966 aa26.15■■□□□ 1.78
CCDC47-204ENST00000582252 CKAP2LQ8IYA6 745 aa26.15■■□□□ 1.78
CCDC47-204ENST00000582252 TGFBRAP1Q8WUH2 860 aa26.15■■□□□ 1.78
CCDC47-204ENST00000582252 MKNK2Q9HBH9 465 aa26.15■■□□□ 1.78
CCDC47-204ENST00000582252 FKBP1AP62942 108 aaKnown RBP26.14■■□□□ 1.78
CCDC47-204ENST00000582252 TROAPQ12815 778 aa26.14■■□□□ 1.78
CCDC47-204ENST00000582252 GRIK5Q16478 980 aa26.14■■□□□ 1.78
CCDC47-204ENST00000582252 NOSTRINQ8IVI9 506 aa26.14■■□□□ 1.78
CCDC47-204ENST00000582252 ENGASEQ8NFI3 743 aa26.14■■□□□ 1.78
CCDC47-204ENST00000582252 GOLPH3LQ9H4A5 285 aa26.14■■□□□ 1.78
CCDC47-204ENST00000582252 GAKO14976 1311 aa26.14■■□□□ 1.77
CCDC47-204ENST00000582252 ESPNB1AK53 854 aa26.14■■□□□ 1.77
CCDC47-204ENST00000582252 NFKBIEO00221 500 aa26.14■■□□□ 1.77
CCDC47-204ENST00000582252 TEX11Q8IYF3 940 aa26.14■■□□□ 1.77
CCDC47-204ENST00000582252 MRVI1Q9Y6F6 885 aa26.14■■□□□ 1.77
CCDC47-204ENST00000582252 USP17L3A6NCW0 530 aa26.13■■□□□ 1.77
CCDC47-204ENST00000582252 USP17L4A6NCW7 530 aa26.13■■□□□ 1.77
CCDC47-204ENST00000582252 KIF5BP33176 963 aa26.13■■□□□ 1.77
CCDC47-204ENST00000582252 GUCY1A2P33402 732 aa26.13■■□□□ 1.77
CCDC47-204ENST00000582252 SNW1Q13573 536 aaKnown RBP26.13■■□□□ 1.77
CCDC47-204ENST00000582252 FAM47AQ5JRC9 791 aa26.13■■□□□ 1.77
CCDC47-204ENST00000582252 USP17L1Q7RTZ2 530 aa26.13■■□□□ 1.77
CCDC47-204ENST00000582252 DGKHQ86XP1 1220 aa26.13■■□□□ 1.77
CCDC47-204ENST00000582252 DIS3L2Q8IYB7 885 aaKnown RBP26.13■■□□□ 1.77
CCDC47-204ENST00000582252 DDX60LQ5H9U9 1706 aaKnown RBP26.12■■□□□ 1.77
CCDC47-204ENST00000582252 ZNF444Q8N0Y2 327 aaPredicted RBP26.12■■□□□ 1.77
CCDC47-204ENST00000582252 CCDC82Q8N4S0 544 aa26.12■■□□□ 1.77
CCDC47-204ENST00000582252 MAP3K14Q99558 947 aa26.12■■□□□ 1.77
CCDC47-204ENST00000582252 SYT17Q9BSW7 474 aa26.12■■□□□ 1.77
CCDC47-204ENST00000582252 RTN4Q9NQC3 1192 aaKnown RBP26.12■■□□□ 1.77
CCDC47-204ENST00000582252 CCDC39Q9UFE4 941 aa26.12■■□□□ 1.77
CCDC47-204ENST00000582252 FOCADQ5VW36 1801 aa26.12■■□□□ 1.77
CCDC47-204ENST00000582252 RILPL1Q5EBL4 403 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 TMTC3Q6ZXV5 915 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 NIM1KQ8IY84 436 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 KAT14Q9H8E8 782 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 TCP11L1Q9NUJ3 509 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 TAOK2Q9UL54 1235 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 SRCAPQ6ZRS2 3230 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 COL4A5P29400 1685 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 CMA1P23946 247 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 TFAP4Q01664 338 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 DACT2Q5SW24 774 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 FMR1NBQ8N0W7 255 aaPredicted RBP26.11■■□□□ 1.77
CCDC47-204ENST00000582252 CERS5Q8N5B7 392 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 ANKS1AQ92625 1134 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 BRMS1Q9HCU9 246 aa26.11■■□□□ 1.77
CCDC47-204ENST00000582252 MYH1P12882 1939 aa26.1■■□□□ 1.77
CCDC47-204ENST00000582252 MAPKAPK5Q8IW41 473 aa26.1■■□□□ 1.77
CCDC47-204ENST00000582252 KCNQ5Q9NR82 932 aa26.1■■□□□ 1.77
CCDC47-204ENST00000582252 YDJCA8MPS7 323 aa26.09■■□□□ 1.77
CCDC47-204ENST00000582252 TSPY3P0CV98 308 aa26.09■■□□□ 1.77
CCDC47-204ENST00000582252 TSPY8P0CW00 308 aa26.09■■□□□ 1.77
CCDC47-204ENST00000582252 EVX2Q03828 476 aa26.09■■□□□ 1.77
CCDC47-204ENST00000582252 FUT2Q10981 343 aa26.09■■□□□ 1.77
CCDC47-204ENST00000582252 CMTR1Q8N1G2 835 aaKnown RBP26.09■■□□□ 1.77
CCDC47-204ENST00000582252 KCNJ14Q9UNX9 436 aa26.09■■□□□ 1.77
CCDC47-204ENST00000582252 BTBD18B2RXH4 712 aa26.08■■□□□ 1.77
CCDC47-204ENST00000582252 ANO6Q4KMQ2 910 aa26.08■■□□□ 1.77
CCDC47-204ENST00000582252 ZSCAN30Q86W11 494 aa26.08■■□□□ 1.77
CCDC47-204ENST00000582252 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.08■■□□□ 1.77
CCDC47-204ENST00000582252 USP25Q9UHP3 1055 aa26.08■■□□□ 1.77
CCDC47-204ENST00000582252 ZNRF3Q9ULT6 936 aa26.08■■□□□ 1.77
CCDC47-204ENST00000582252 CEP131Q9UPN4 1083 aa26.08■■□□□ 1.77
CCDC47-204ENST00000582252 DICER1Q9UPY3 1922 aaKnown RBP26.08■■□□□ 1.77
CCDC47-204ENST00000582252 UBE2Q2LH0YL09 131 aa26.08■■□□□ 1.76
CCDC47-204ENST00000582252 PTPAQ15257 358 aa26.08■■□□□ 1.76
CCDC47-204ENST00000582252 STX1AQ16623 288 aa26.08■■□□□ 1.76
CCDC47-204ENST00000582252 JDP2Q8WYK2 163 aa26.08■■□□□ 1.76
CCDC47-204ENST00000582252 TTF2Q9UNY4 1162 aaKnown RBP26.08■■□□□ 1.76
CCDC47-204ENST00000582252 A0A1B0GVL5 298 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 CUTAO60888 179 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 PLEKHA8P1O95397 391 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 GNAQP50148 359 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 AXDND1Q5T1B0 1012 aaPredicted RBP26.07■■□□□ 1.76
CCDC47-204ENST00000582252 DYNLL2Q96FJ2 89 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 RRAGDQ9NQL2 400 aaPredicted RBP26.07■■□□□ 1.76
CCDC47-204ENST00000582252 FLT1P17948 1338 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 MYO3BQ8WXR4 1341 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 CNTNAP5Q8WYK1 1306 aa26.07■■□□□ 1.76
CCDC47-204ENST00000582252 NMT2O60551 498 aa26.06■■□□□ 1.76
CCDC47-204ENST00000582252 PTMAP06454 111 aaKnown RBP26.06■■□□□ 1.76
CCDC47-204ENST00000582252 KRT2P35908 639 aa26.06■■□□□ 1.76
CCDC47-204ENST00000582252 NDUFA8P51970 172 aa26.06■■□□□ 1.76
CCDC47-204ENST00000582252 RHBDL3P58872 404 aa26.06■■□□□ 1.76
CCDC47-204ENST00000582252 C16orf86Q6ZW13 317 aa26.06■■□□□ 1.76
CCDC47-204ENST00000582252 SDF4Q9BRK5 362 aa26.06■■□□□ 1.76
CCDC47-204ENST00000582252 MXD3Q9BW11 206 aa26.06■■□□□ 1.76
CCDC47-204ENST00000582252 V9GY48 417 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms