RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 CASP8AP2Q9UKL3 1982 aa24.65■■□□□ 1.54
PPP4R1-221ENST00000582240 A0A1W2PRG0 241 aa24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 HAND2P61296 217 aa24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 TMEM179Q6ZVK1 233 aa24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 SIAH1Q8IUQ4 282 aa24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 CCDC17Q96LX7 622 aa24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 TMOD4Q9NZQ9 345 aa24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 AGTPBP1Q9UPW5 1226 aa24.64■■□□□ 1.54
PPP4R1-221ENST00000582240 ROBO3Q96MS0 1386 aa24.64■■□□□ 1.53
PPP4R1-221ENST00000582240 ATP2B2Q01814 1243 aa24.63■■□□□ 1.53
PPP4R1-221ENST00000582240 USP17L2Q6R6M4 530 aa24.63■■□□□ 1.53
PPP4R1-221ENST00000582240 PROCA1Q8NCQ7 364 aaPredicted RBP24.63■■□□□ 1.53
PPP4R1-221ENST00000582240 ZCCHC17Q9NP64 241 aaKnown RBP24.63■■□□□ 1.53
PPP4R1-221ENST00000582240 C19orf81C9J6K1 198 aa24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 TLR2O60603 784 aa24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 MFAP1P55081 439 aaKnown RBP24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 CAP1Q01518 475 aa24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 FAM47AQ5JRC9 791 aa24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 ZNF444Q8N0Y2 327 aaPredicted RBP24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 CD99L2Q8TCZ2 262 aa24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 TAOK2Q9UL54 1235 aa24.62■■□□□ 1.53
PPP4R1-221ENST00000582240 ICA1Q05084 483 aa24.61■■□□□ 1.53
PPP4R1-221ENST00000582240 SLC3A2P08195 630 aaKnown RBP24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 EEF2P13639 858 aaKnown RBP24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 SP3Q02447 781 aa24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 PDE4BQ07343 736 aa24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 KIAA1755Q5JYT7 1200 aa24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 ERICH6BQ5W0A0 696 aa24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 TNS4Q8IZW8 715 aa24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 PARK7Q99497 189 aaKnown RBP24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 ADGRA2Q96PE1 1338 aa24.6■■□□□ 1.53
PPP4R1-221ENST00000582240 PTPRFP10586 1907 aa24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 NOM1Q5C9Z4 860 aaKnown RBP24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 C17orf99Q6UX52 265 aa24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 NBPF3Q9H094 633 aa24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 KIAA1683Q9H0B3 1180 aa24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 ASCC2Q9H1I8 757 aaPredicted RBP24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 ANAPC4Q9UJX5 808 aa24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.59■■□□□ 1.53
PPP4R1-221ENST00000582240 PEX10O60683 326 aa24.58■■□□□ 1.53
PPP4R1-221ENST00000582240 TFAP4Q01664 338 aa24.58■■□□□ 1.53
PPP4R1-221ENST00000582240 PTH1RQ03431 593 aa24.58■■□□□ 1.53
PPP4R1-221ENST00000582240 P2RX7Q99572 595 aaKnown RBP24.58■■□□□ 1.53
PPP4R1-221ENST00000582240 SLC45A1Q9Y2W3 748 aa24.58■■□□□ 1.53
PPP4R1-221ENST00000582240 OSBPP22059 807 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 USP14P54578 494 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 RRP12Q5JTH9 1297 aaKnown RBP24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 NKX2-3Q8TAU0 364 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 RUFY2Q8WXA3 655 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 ARHGAP39Q9C0H5 1083 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 KANSL2Q9H9L4 492 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 ZNF287Q9HBT7 754 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 ARHGEF10LQ9HCE6 1279 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 TOMM22Q9NS69 142 aa24.57■■□□□ 1.52
PPP4R1-221ENST00000582240 BMP2KLQ5H9B9 411 aa24.56■■□□□ 1.52
PPP4R1-221ENST00000582240 TBC1D10CQ8IV04 446 aa24.56■■□□□ 1.52
PPP4R1-221ENST00000582240 SPICE1Q8N0Z3 855 aa24.56■■□□□ 1.52
PPP4R1-221ENST00000582240 SMCR8Q8TEV9 937 aaPredicted RBP24.56■■□□□ 1.52
PPP4R1-221ENST00000582240 C12orf42Q96LP6 360 aa24.56■■□□□ 1.52
PPP4R1-221ENST00000582240 DSCC1Q9BVC3 393 aa24.56■■□□□ 1.52
PPP4R1-221ENST00000582240 MCOLN1Q9GZU1 580 aa24.56■■□□□ 1.52
PPP4R1-221ENST00000582240 IGKV6D-41A0A0C4DH26 115 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 SGSM2O43147 1006 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 RAD21O60216 631 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 RANBP6O60518 1105 aaKnown RBP24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 TSPY3P0CV98 308 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 TSPY8P0CW00 308 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 VCAM1P19320 739 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 IRX3P78415 501 aaPredicted RBP24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 PABPC4Q13310 644 aaKnown RBP eCLIP24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 CTU1Q7Z7A3 348 aaKnown RBP24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 CLIP2Q9UDT6 1046 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 TMX2Q9Y320 296 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 ZMYM6O95789 1325 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 MYH8P13535 1937 aa24.55■■□□□ 1.52
PPP4R1-221ENST00000582240 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 BCRP11274 1271 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 HOXA7P31268 230 aaPredicted RBP24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 ANKRD13CQ8N6S4 541 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 NEDD1Q8NHV4 660 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 CEP95Q96GE4 821 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 ERO1AQ96HE7 468 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 RPAP3Q9H6T3 665 aaPredicted RBP24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 PNMA3Q9UL41 463 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 RAD50Q92878 1312 aa24.54■■□□□ 1.52
PPP4R1-221ENST00000582240 ZNF213O14771 459 aa24.53■■□□□ 1.52
PPP4R1-221ENST00000582240 NMT2O60551 498 aa24.53■■□□□ 1.52
PPP4R1-221ENST00000582240 CTGFP29279 349 aa24.53■■□□□ 1.52
PPP4R1-221ENST00000582240 CHMP4CQ96CF2 233 aa24.53■■□□□ 1.52
PPP4R1-221ENST00000582240 TRIM17Q9Y577 477 aa24.53■■□□□ 1.52
PPP4R1-221ENST00000582240 TSPY2A6NKD2 308 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L15C9J2P7 530 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L13C9JLJ4 530 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L11C9JVI0 530 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L18D6R9N7 530 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L22D6RA61 530 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L17D6RBQ6 530 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L19D6RCP7 530 aa24.52■■□□□ 1.52
PPP4R1-221ENST00000582240 USP17L20D6RJB6 530 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms