RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 WNT7BP56706 349 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 RTP1P59025 263 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 TRIM28Q13263 835 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 AAK1Q2M2I8 961 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 TDRD3Q9H7E2 651 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CD209Q9NNX6 404 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 TCP10L2B9ZVM9 353 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 AXIN1O15169 862 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 INPP5BP32019 993 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PDE4DQ08499 809 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PTCRAQ6ISU1 281 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PLBD2Q8NHP8 589 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 LEMD3Q9Y2U8 911 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 SLC45A1Q9Y2W3 748 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 DOCK3Q8IZD9 2030 aa10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 KMT2BQ9UMN6 2715 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-221ENST00000581662 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 ERC2O15083 957 aa10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 SKOR1P84550 965 aa10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 FAM110CQ1W6H9 321 aa10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CCDC85AQ96PX6 553 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PDLIM7Q9NR12 457 aa10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 ZNF318Q5VUA4 2279 aa10.03□□□□□ -0.8
CDK5RAP3-221ENST00000581662 RPAP1Q9BWH6 1393 aaPredicted RBP10.02□□□□□ -0.8
CDK5RAP3-221ENST00000581662 DCHS1Q96JQ0 3298 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 J3QL48 77 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CXCL11O14625 94 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 TNNI2P48788 182 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CNGB1Q14028 1251 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PTPRNQ16849 979 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CSPP1Q1MSJ5 1256 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 NOL9Q5SY16 702 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CD320Q9NPF0 282 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 LRRC37A2A6NM11 1700 aa10.02□□□□□ -0.81
CDK5RAP3-221ENST00000581662 A0A0G2JLL6 359 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 AVPP01185 164 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 HSP90B1P14625 803 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 SMPD1P17405 629 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CACNB2Q08289 660 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 SNX17Q15036 470 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 KRT24Q2M2I5 525 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CTC1Q2NKJ3 1217 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 SH3RF1Q7Z6J0 888 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PRRT2Q7Z6L0 340 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 DZIP1LQ8IYY4 767 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CDC5LQ99459 802 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PBX4Q9BYU1 374 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ZNF112Q9UJU3 913 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 DAGLAQ9Y4D2 1042 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PCDHB15Q9Y5E8 787 aa10.01□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PLXNB2O15031 1838 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 SPTLC1O15269 473 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PDE8AO60658 829 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 KRT37O76014 449 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 IL1R1P14778 569 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 IGFBP4P22692 258 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ITGB8P26012 769 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CCND3P30281 292 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 EHBP1Q8NDI1 1231 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CCER1Q8TC90 406 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 SMCR8Q8TEV9 937 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ZNF341Q9BYN7 854 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PRDM5Q9NQX1 630 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ATP11BQ9Y2G3 1177 aa10□□□□□ -0.81
CDK5RAP3-221ENST00000581662 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 DCAF15Q66K64 600 aa9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 C15orf52Q6ZUT6 534 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 FASTKD5Q7L8L6 764 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CRIPAKQ8N1N5 446 aa9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 HOOK2Q96ED9 719 aa9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 EVA1BQ9NVM1 165 aa9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 DACH1Q9UI36 760 aa9.99□□□□□ -0.81
CDK5RAP3-221ENST00000581662 FRMPD3Q5JV73 1810 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 DNM1LO00429 736 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 PCCAP05165 728 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CTHP32929 405 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CACNB3P54284 484 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 TRIM60Q495X7 471 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ERMP1Q7Z2K6 904 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 HERVK_113Q902F9 699 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ZNF775Q96BV0 537 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 JAG2Q9Y219 1238 aa9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 ZFHX2Q9C0A1 2572 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-221ENST00000581662 CTSWP56202 376 aa9.97□□□□□ -0.81
CDK5RAP3-221ENST00000581662 KCNH2Q12809 1159 aa9.97□□□□□ -0.81
CDK5RAP3-221ENST00000581662 NFE2L2Q16236 605 aa9.97□□□□□ -0.81
CDK5RAP3-221ENST00000581662 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
CDK5RAP3-221ENST00000581662 RASIP1Q5U651 963 aa9.97□□□□□ -0.81
CDK5RAP3-221ENST00000581662 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms