RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 FOXP4Q8IVH2 680 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-211ENST00000581536 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-211ENST00000581536 ZDHHC16Q969W1 377 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 ARHGAP39Q9C0H5 1083 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 CPA4Q9UI42 421 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 HPS5Q9UPZ3 1129 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 TRIM17Q9Y577 477 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 MGAMO43451 1857 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-211ENST00000581536 TRIM75PA6NK02 468 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 PRKAB2O43741 272 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 TLR2O60603 784 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 GDF11O95390 407 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 CYP2C8P10632 490 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 PLCD1P51178 756 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 SPP2Q13103 211 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 GADL1Q6ZQY3 521 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-211ENST00000581536 ANKRD23Q86SG2 305 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 LCORLQ8N3X6 602 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
TOP3A-211ENST00000581536 ARMT1Q9H993 441 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
TOP3A-211ENST00000581536 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-211ENST00000581536 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 SMIM22K7EJ46 135 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 IGSF3O75054 1194 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 CTGFP29279 349 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 ADD2P35612 726 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-211ENST00000581536 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 ECHDC1Q9NTX5 307 aa11.75□□□□□ -0.53
TOP3A-211ENST00000581536 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
TOP3A-211ENST00000581536 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 CYP2D6P10635 497 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 PBX2P40425 430 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 SOX10P56693 466 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
TOP3A-211ENST00000581536 TREML2Q5T2D2 321 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 FBXO46Q6PJ61 603 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-211ENST00000581536 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 PTPN22Q9Y2R2 807 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
TOP3A-211ENST00000581536 MYH8P13535 1937 aa11.74□□□□□ -0.53
TOP3A-211ENST00000581536 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
TOP3A-211ENST00000581536 MBD4O95243 580 aa11.73□□□□□ -0.53
TOP3A-211ENST00000581536 ANKRD45Q5TZF3 282 aa11.73□□□□□ -0.53
TOP3A-211ENST00000581536 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
TOP3A-211ENST00000581536 FASTKD5Q7L8L6 764 aaKnown RBP11.73□□□□□ -0.53
TOP3A-211ENST00000581536 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
TOP3A-211ENST00000581536 PUS7LQ9H0K6 701 aaKnown RBP11.73□□□□□ -0.53
TOP3A-211ENST00000581536 ZCCHC17Q9NP64 241 aaKnown RBP11.73□□□□□ -0.53
TOP3A-211ENST00000581536 BRCA2P51587 3418 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 ADGRA2Q96PE1 1338 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 CYP2D7A0A087X1C5 515 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 IGHDP01880 384 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 POLR3DP05423 398 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-211ENST00000581536 HLA-DOAP06340 250 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 MLLT3P42568 568 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-211ENST00000581536 RGS19P49795 217 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 HMGCS2P54868 508 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 NBR1Q14596 966 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 TATDN1Q6P1N9 297 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 TRIM34Q9BYJ4 488 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
TOP3A-211ENST00000581536 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-211ENST00000581536 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
TOP3A-211ENST00000581536 PEX10O60683 326 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 GH2P01242 217 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 OSBPP22059 807 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 SHMT1P34896 483 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-211ENST00000581536 UBE3CQ15386 1083 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-211ENST00000581536 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-211ENST00000581536 TTC6Q86TZ1 520 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 PI4K2BQ8TCG2 481 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 DYNLL2Q96FJ2 89 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 WDR18Q9BV38 432 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■■□ 21.2
TOP3A-211ENST00000581536 SERPINB13Q9UIV8 391 aa11.71□□□□□ -0.53
TOP3A-211ENST00000581536 DDX60LQ5H9U9 1706 aaKnown RBP11.71□□□□□ -0.54
TOP3A-211ENST00000581536 MKI67P46013 3256 aaKnown RBP11.7□□□□□ -0.54
TOP3A-211ENST00000581536 LOC285556D6RIA3 1793 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 ARHGAP33O14559 1287 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 ASNSP08243 561 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 BCRP11274 1271 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 PSMC4P43686 418 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 IRX6P78412 446 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-211ENST00000581536 GABPAQ06546 454 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 MTMR2Q13614 643 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 B4GALNT3Q6L9W6 998 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 CERS3Q8IU89 383 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 SLC44A5Q8NCS7 719 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 OSBP2Q969R2 916 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 TRIM47Q96LD4 638 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms