RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 MTMR2Q13614 643 aa15.08■□□□□ 0
SNORD55-201ENST00000581525 GADL1Q6ZQY3 521 aa15.08■□□□□ 0
SNORD55-201ENST00000581525 ERO1AQ96HE7 468 aa15.08■□□□□ 0
SNORD55-201ENST00000581525 PARK7Q99497 189 aaKnown RBP15.08■□□□□ 0
SNORD55-201ENST00000581525 HTTP42858 3142 aa15.08■□□□□ 0
SNORD55-201ENST00000581525 LOC285556D6RIA3 1793 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 IGKV6D-41A0A0C4DH26 115 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 A0A1W2PRG0 241 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 APPP05067 770 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 TDO2P48775 406 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 MFAP1P55081 439 aaKnown RBP15.07■□□□□ 0
SNORD55-201ENST00000581525 PPARAQ07869 468 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 RAB3GAP1Q15042 981 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 ACER1Q8TDN7 264 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 MCOLN1Q9GZU1 580 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 NAPBQ9H115 298 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 KANSL2Q9H9L4 492 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 ZNF287Q9HBT7 754 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.07■□□□□ 0
SNORD55-201ENST00000581525 TMX2Q9Y320 296 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 CCDC171Q6TFL3 1326 aa15.07■□□□□ 0
SNORD55-201ENST00000581525 MINDY4BA8MYZ0 360 aa15.06■□□□□ 0
SNORD55-201ENST00000581525 GNRH1P01148 92 aa15.06■□□□□ 0
SNORD55-201ENST00000581525 CYP2C8P10632 490 aa15.06■□□□□ 0
SNORD55-201ENST00000581525 LACTBP83111 547 aaPredicted RBP15.06■□□□□ 0
SNORD55-201ENST00000581525 MKL1Q969V6 931 aa15.06■□□□□ 0
SNORD55-201ENST00000581525 ASCC2Q9H1I8 757 aaPredicted RBP15.06■□□□□ 0
SNORD55-201ENST00000581525 TMOD4Q9NZQ9 345 aa15.06■□□□□ 0
SNORD55-201ENST00000581525 PNMA3Q9UL41 463 aa15.06■□□□□ 0
SNORD55-201ENST00000581525 OSBPP22059 807 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 CHMLP26374 656 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 GCLCP48506 637 aaPredicted RBP15.05■□□□□ -0
SNORD55-201ENST00000581525 NOVP48745 357 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 DGKZQ13574 1117 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 ARHGEF6Q15052 776 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 LBX2Q6XYB7 198 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 OTOP1Q7RTM1 612 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 DSCC1Q9BVC3 393 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 NYAP2Q9P242 653 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 MORF4L1Q9UBU8 362 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 SYNPO2Q9UMS6 1093 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 TACC3Q9Y6A5 838 aa15.05■□□□□ -0
SNORD55-201ENST00000581525 PLIN4Q96Q06 1357 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L15C9J2P7 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L11C9JVI0 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L18D6R9N7 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L22D6RA61 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L19D6RCP7 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L20D6RJB6 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 ORC4O43929 436 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
SNORD55-201ENST00000581525 PDE4BQ07343 736 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 USP17L24Q0WX57 530 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 FAM110CQ1W6H9 321 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 IFFO2Q5TF58 517 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 POTEEQ6S8J3 1075 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 CWC27Q6UX04 472 aaKnown RBP15.04■□□□□ -0
SNORD55-201ENST00000581525 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
SNORD55-201ENST00000581525 NEDD1Q8NHV4 660 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 CD99L2Q8TCZ2 262 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 LPAR1Q92633 364 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 P2RX7Q99572 595 aaKnown RBP15.04■□□□□ -0
SNORD55-201ENST00000581525 MKNK2Q9HBH9 465 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 DIAPH3Q9NSV4 1193 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 CPA4Q9UI42 421 aa15.04■□□□□ -0
SNORD55-201ENST00000581525 GREB1LQ9C091 1923 aaPredicted RBP15.04■□□□□ -0
SNORD55-201ENST00000581525 RAD50Q92878 1312 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
SNORD55-201ENST00000581525 SLC3A2P08195 630 aaKnown RBP15.03■□□□□ -0
SNORD55-201ENST00000581525 PCP11498 1178 aaKnown RBP15.03■□□□□ -0
SNORD55-201ENST00000581525 CTGFP29279 349 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 NT5C2P49902 561 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 ICA1Q05084 483 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 FBXO46Q6PJ61 603 aaPredicted RBP15.03■□□□□ -0
SNORD55-201ENST00000581525 IL25Q9H293 177 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 SH2D4AQ9H788 454 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 VCPKMTQ9H867 229 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 EFCC1Q9HA90 598 aa15.03■□□□□ -0
SNORD55-201ENST00000581525 EEF2P13639 858 aaKnown RBP15.02■□□□□ -0
SNORD55-201ENST00000581525 VCAM1P19320 739 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 PRMT2P55345 433 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 BMP2KLQ5H9B9 411 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 KIAA1755Q5JYT7 1200 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
SNORD55-201ENST00000581525 ABHD8Q96I13 439 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 CCDC136Q96JN2 1154 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 ARHGEF10LQ9HCE6 1279 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 MTMR4Q9NYA4 1195 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 PTPN22Q9Y2R2 807 aa15.02■□□□□ -0
SNORD55-201ENST00000581525 HERVK_113P62684 666 aa15.01□□□□□ -0.01
SNORD55-201ENST00000581525 CTDSPL2Q05D32 466 aa15.01□□□□□ -0.01
SNORD55-201ENST00000581525 KIF22Q14807 665 aa15.01□□□□□ -0.01
SNORD55-201ENST00000581525 TRIM47Q96LD4 638 aa15.01□□□□□ -0.01
SNORD55-201ENST00000581525 NBPF3Q9H094 633 aa15.01□□□□□ -0.01
SNORD55-201ENST00000581525 TCP11L1Q9NUJ3 509 aa15.01□□□□□ -0.01
SNORD55-201ENST00000581525 RBPJLQ9UBG7 517 aa15.01□□□□□ -0.01
SNORD55-201ENST00000581525 TRIM17Q9Y577 477 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms