RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 EXOC1Q9NV70 894 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 ERBB4Q15303 1308 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 TLDC2A0PJX2 215 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 PTH1RQ03431 593 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.24□□□□□ -1.09
CMTM4-205ENST00000581487 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 SELENOOQ9BVL4 669 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 USP44Q9H0E7 712 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 OSBPL3Q9H4L5 887 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 RNMTO43148 476 aaKnown RBP8.24□□□□□ -1.09
CMTM4-205ENST00000581487 RXRAP19793 462 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 TRIM63Q969Q1 353 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 IMPACTQ9P2X3 320 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 GUCA1BQ9UMX6 200 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 ZNF131P52739 623 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 NACA2Q9H009 215 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 MRPL46Q9H2W6 279 aaKnown RBP8.24□□□□□ -1.09
CMTM4-205ENST00000581487 HAUS2Q9NVX0 235 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 WWC3Q9ULE0 1092 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 SLC4A4Q9Y6R1 1079 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 CTTNBP2Q8WZ74 1663 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 CEP104O60308 925 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 DAB2P98082 770 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 CUL4AQ13619 759 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 INF2Q27J81 1249 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 DDX42Q86XP3 938 aaKnown RBP eCLIP8.24□□□□□ -1.09
CMTM4-205ENST00000581487 TMCO5AQ8N6Q1 288 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 TEX9Q8N6V9 391 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 ESR2Q92731 530 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 SUCLG2Q96I99 432 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 TEX13AQ9BXU3 409 aaPredicted RBP8.24□□□□□ -1.09
CMTM4-205ENST00000581487 PLEKHA4Q9H4M7 779 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 FBXO2Q9UK22 296 aaPredicted RBP8.24□□□□□ -1.09
CMTM4-205ENST00000581487 SBNO1A3KN83 1393 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 KRT83P78385 493 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 SPATS2Q86XZ4 545 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 APLFQ8IW19 511 aaPredicted RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 SIRT2Q8IXJ6 389 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 FAM212AQ96EL1 285 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 CALML4Q96GE6 196 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 RASAL2Q9UJF2 1139 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 ZNF215Q9UL58 517 aaPredicted RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 PPP1R9AQ9ULJ8 1098 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 TUBBP07437 444 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 VAV2P52735 878 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 A6NNZ2 444 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 LMNAP02545 664 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 ADRA2BP18089 450 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 HIF1AQ16665 826 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 TUBB8Q3ZCM7 444 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 ARMC9Q7Z3E5 817 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 CNGA4Q8IV77 575 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 STAG1Q8WVM7 1258 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 USP6NLQ92738 828 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 TPCN1Q9ULQ1 816 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 BZW2Q9Y6E2 419 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 EIF4G3O43432 1585 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 AKR1B15C9JRZ8 316 aaPredicted RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 TBC1D12O60347 775 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 HNRNPH2P55795 449 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 PHEXP78562 749 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 MAP3K21Q5TCX8 1036 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 GSTA5Q7RTV2 222 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 ZNF444Q8N0Y2 327 aaPredicted RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 CRACR2BQ8N4Y2 399 aaPredicted RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 RBM46Q8TBY0 533 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 PSMA7O14818 248 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 KRT86O43790 486 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 SNUPNO95149 360 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 NLRP12P59046 1061 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 GNGT1P63211 74 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 PPP1R7Q15435 360 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 SPATA17Q96L03 361 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 KAT14Q9H8E8 782 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 MAP10Q9P2G4 905 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 STAP2Q9UGK3 403 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 KCNH3Q9ULD8 1083 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 NSFL1CQ9UNZ2 370 aaKnown RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 TSPY2A6NKD2 308 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 SPDYE16A6NNV3 312 aaPredicted RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 ECM2O94769 699 aaPredicted RBP8.23□□□□□ -1.09
CMTM4-205ENST00000581487 STAT6P42226 847 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 RNF34Q969K3 372 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 RMDN2Q96LZ7 410 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 TSC22D3Q99576 134 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 ZSWIM6Q9HCJ5 1215 aa8.23□□□□□ -1.09
CMTM4-205ENST00000581487 ARHGAP6O43182 974 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 FAM135BQ49AJ0 1406 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 KRT3P12035 628 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 CCT6AP40227 531 aaKnown RBP8.22□□□□□ -1.09
CMTM4-205ENST00000581487 TRPC3Q13507 836 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 C16orf62Q7Z3J2 963 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 UNC5CLQ8IV45 518 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 XPO4Q9C0E2 1151 aaKnown RBP8.22□□□□□ -1.09
CMTM4-205ENST00000581487 LSG1Q9H089 658 aaKnown RBP8.22□□□□□ -1.09
CMTM4-205ENST00000581487 PPANQ9NQ55 473 aaKnown RBP8.22□□□□□ -1.09
CMTM4-205ENST00000581487 GCC2Q8IWJ2 1684 aa8.22□□□□□ -1.09
CMTM4-205ENST00000581487 E9PMD0 336 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms