RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 USP17L22D6RA61 530 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 USP17L17D6RBQ6 530 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 USP17L19D6RCP7 530 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 USP17L20D6RJB6 530 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 ZKSCAN1P17029 563 aaPredicted RBP25.27■■□□□ 1.64
SNX11-207ENST00000580875 USP14P54578 494 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 USP17L24Q0WX57 530 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 POTEEQ6S8J3 1075 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 USP6NLQ92738 828 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 KIAA1683Q9H0B3 1180 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 OGDHLQ9ULD0 1010 aa25.27■■□□□ 1.64
SNX11-207ENST00000580875 MAGEB6P1A0A0J9YX57 407 aa25.26■■□□□ 1.63
SNX11-207ENST00000580875 A0A1W2PPC1 479 aa25.26■■□□□ 1.63
SNX11-207ENST00000580875 RGS2P41220 211 aa25.26■■□□□ 1.63
SNX11-207ENST00000580875 MORN1Q5T089 497 aa25.26■■□□□ 1.63
SNX11-207ENST00000580875 PLEKHH3Q7Z736 793 aa25.26■■□□□ 1.63
SNX11-207ENST00000580875 CABP5Q9NP86 173 aa25.26■■□□□ 1.63
SNX11-207ENST00000580875 RABGAP1Q9Y3P9 1069 aa25.26■■□□□ 1.63
SNX11-207ENST00000580875 POLR3DP05423 398 aaPredicted RBP25.25■■□□□ 1.63
SNX11-207ENST00000580875 MS4A1P11836 297 aa25.25■■□□□ 1.63
SNX11-207ENST00000580875 SHMT1P34896 483 aa25.25■■□□□ 1.63
SNX11-207ENST00000580875 MNX1P50219 401 aaPredicted RBP25.25■■□□□ 1.63
SNX11-207ENST00000580875 PLCD1P51178 756 aa25.25■■□□□ 1.63
SNX11-207ENST00000580875 SLC9C2Q5TAH2 1124 aa25.25■■□□□ 1.63
SNX11-207ENST00000580875 CLASRPQ8N2M8 674 aaKnown RBP25.25■■□□□ 1.63
SNX11-207ENST00000580875 C11orf49Q9H6J7 331 aa25.25■■□□□ 1.63
SNX11-207ENST00000580875 CWC22Q9HCG8 908 aaKnown RBP25.25■■□□□ 1.63
SNX11-207ENST00000580875 PDE6AP16499 860 aa25.24■■□□□ 1.63
SNX11-207ENST00000580875 VCAM1P19320 739 aa25.24■■□□□ 1.63
SNX11-207ENST00000580875 CCNA1P78396 465 aa25.24■■□□□ 1.63
SNX11-207ENST00000580875 CATSPERGQ6ZRH7 1159 aa25.24■■□□□ 1.63
SNX11-207ENST00000580875 KIF1BPQ96EK5 621 aa25.24■■□□□ 1.63
SNX11-207ENST00000580875 APBA2Q99767 749 aa25.24■■□□□ 1.63
SNX11-207ENST00000580875 CNMDO75829 334 aa25.23■■□□□ 1.63
SNX11-207ENST00000580875 CACNB2Q08289 660 aaPredicted RBP25.23■■□□□ 1.63
SNX11-207ENST00000580875 C7orf61Q8IZ16 206 aa25.23■■□□□ 1.63
SNX11-207ENST00000580875 ACER1Q8TDN7 264 aa25.23■■□□□ 1.63
SNX11-207ENST00000580875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.23■■□□□ 1.63
SNX11-207ENST00000580875 CRNKL1Q9BZJ0 848 aaKnown RBP25.23■■□□□ 1.63
SNX11-207ENST00000580875 STAP2Q9UGK3 403 aa25.23■■□□□ 1.63
SNX11-207ENST00000580875 GLRX3O76003 335 aaKnown RBP25.22■■□□□ 1.63
SNX11-207ENST00000580875 CCL14Q16627 93 aa25.22■■□□□ 1.63
SNX11-207ENST00000580875 RPAP2Q8IXW5 612 aaPredicted RBP25.22■■□□□ 1.63
SNX11-207ENST00000580875 DDX60LQ5H9U9 1706 aaKnown RBP25.22■■□□□ 1.63
SNX11-207ENST00000580875 ZNF532Q9HCE3 1301 aa25.21■■□□□ 1.63
SNX11-207ENST00000580875 APBB1O00213 710 aa25.21■■□□□ 1.63
SNX11-207ENST00000580875 HMMRO75330 724 aa25.21■■□□□ 1.63
SNX11-207ENST00000580875 IFIT2P09913 472 aaKnown RBP25.21■■□□□ 1.63
SNX11-207ENST00000580875 GABPAQ06546 454 aa25.21■■□□□ 1.63
SNX11-207ENST00000580875 LBX2Q6XYB7 198 aa25.21■■□□□ 1.63
SNX11-207ENST00000580875 DNAJC2Q99543 621 aaKnown RBP25.21■■□□□ 1.63
SNX11-207ENST00000580875 MCM9Q9NXL9 1143 aa25.21■■□□□ 1.63
SNX11-207ENST00000580875 ALPK3Q96L96 1907 aa25.2■■□□□ 1.62
SNX11-207ENST00000580875 GOLIM4O00461 696 aa25.2■■□□□ 1.62
SNX11-207ENST00000580875 GUCY1A2P33402 732 aa25.2■■□□□ 1.62
SNX11-207ENST00000580875 MAP2K5Q13163 448 aa25.2■■□□□ 1.62
SNX11-207ENST00000580875 RPAP3Q9H6T3 665 aaPredicted RBP25.2■■□□□ 1.62
SNX11-207ENST00000580875 SEPT2Q15019 361 aa25.19■■□□□ 1.62
SNX11-207ENST00000580875 WDR78Q5VTH9 848 aa25.19■■□□□ 1.62
SNX11-207ENST00000580875 EDC3Q96F86 508 aaKnown RBP25.19■■□□□ 1.62
SNX11-207ENST00000580875 DDX19BQ9UMR2 479 aa25.19■■□□□ 1.62
SNX11-207ENST00000580875 NAV1Q8NEY1 1877 aa25.18■■□□□ 1.62
SNX11-207ENST00000580875 TCRBV5S4A2TA0A5A2 114 aa25.18■■□□□ 1.62
SNX11-207ENST00000580875 SLC15A5A6NIM6 579 aa25.18■■□□□ 1.62
SNX11-207ENST00000580875 CCND3P30281 292 aaPredicted RBP25.18■■□□□ 1.62
SNX11-207ENST00000580875 DCP1AQ9NPI6 582 aaPredicted RBP25.18■■□□□ 1.62
SNX11-207ENST00000580875 ZBTB40Q9NUA8 1239 aa25.18■■□□□ 1.62
SNX11-207ENST00000580875 BTBD7Q9P203 1132 aa25.18■■□□□ 1.62
SNX11-207ENST00000580875 ZMYND8Q9ULU4 1186 aaPredicted RBP25.18■■□□□ 1.62
SNX11-207ENST00000580875 PFASO15067 1338 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 SPDYE16A6NNV3 312 aaPredicted RBP25.17■■□□□ 1.62
SNX11-207ENST00000580875 MPHOSPH10O00566 681 aaKnown RBP25.17■■□□□ 1.62
SNX11-207ENST00000580875 RAB11FIP3O75154 756 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 BMP8BP34820 402 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 LHX8Q68G74 356 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 SIRT2Q8IXJ6 389 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 LCORLQ8N3X6 602 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 SDR42E1Q8WUS8 393 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 GDF15Q99988 308 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 IVNS1ABPQ9Y6Y0 642 aa25.17■■□□□ 1.62
SNX11-207ENST00000580875 COL6A1P12109 1028 aa25.16■■□□□ 1.62
SNX11-207ENST00000580875 PTPREP23469 700 aa25.16■■□□□ 1.62
SNX11-207ENST00000580875 EVX2Q03828 476 aa25.16■■□□□ 1.62
SNX11-207ENST00000580875 MFSD14CQ5VZR4 134 aa25.16■■□□□ 1.62
SNX11-207ENST00000580875 BCL11AQ9H165 835 aa25.16■■□□□ 1.62
SNX11-207ENST00000580875 COG6Q9Y2V7 657 aa25.16■■□□□ 1.62
SNX11-207ENST00000580875 GRB14Q14449 540 aa25.15■■□□□ 1.62
SNX11-207ENST00000580875 A0A1W2PRG0 241 aa25.14■■□□□ 1.62
SNX11-207ENST00000580875 SOX1O00570 391 aaPredicted RBP25.14■■□□□ 1.62
SNX11-207ENST00000580875 HOXC6P09630 235 aa25.14■■□□□ 1.62
SNX11-207ENST00000580875 SYN1P17600 705 aa25.14■■□□□ 1.62
SNX11-207ENST00000580875 TMEM179Q6ZVK1 233 aa25.14■■□□□ 1.62
SNX11-207ENST00000580875 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.62
SNX11-207ENST00000580875 PAG1Q9NWQ8 432 aa25.14■■□□□ 1.62
SNX11-207ENST00000580875 FLRT1Q9NZU1 646 aa25.14■■□□□ 1.62
SNX11-207ENST00000580875 SWAP70Q9UH65 585 aa25.14■■□□□ 1.62
SNX11-207ENST00000580875 LAMA3Q16787 3333 aa25.14■■□□□ 1.61
SNX11-207ENST00000580875 CYP2D6P10635 497 aa25.13■■□□□ 1.61
SNX11-207ENST00000580875 COG2Q14746 738 aa25.13■■□□□ 1.61
SNX11-207ENST00000580875 SLC44A5Q8NCS7 719 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms