RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PRAMEF13Q5VWM6 474 aa6.27□□□□□ -1.41
SMG8-205ENST00000580798 ZNF605Q86T29 641 aa6.27□□□□□ -1.41
SMG8-205ENST00000580798 CDH24Q86UP0 819 aa6.27□□□□□ -1.41
SMG8-205ENST00000580798 CREG2Q8IUH2 290 aa6.27□□□□□ -1.41
SMG8-205ENST00000580798 MARCH10Q8NA82 808 aaPredicted RBP6.27□□□□□ -1.41
SMG8-205ENST00000580798 SLC6A17Q9H1V8 727 aa6.27□□□□□ -1.41
SMG8-205ENST00000580798 CNOT6Q9ULM6 557 aaKnown RBP6.27□□□□□ -1.41
SMG8-205ENST00000580798 CYP8B1Q9UNU6 501 aa6.27□□□□□ -1.41
SMG8-205ENST00000580798 PNMA6FA0A0J9YX94 578 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 PEX10O60683 326 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 TRIM13O60858 407 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 SEMA7AO75326 666 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 CST3P01034 146 aaPredicted RBP6.26□□□□□ -1.41
SMG8-205ENST00000580798 CYP7A1P22680 504 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 GSTT1P30711 240 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 ETF1P62495 437 aaKnown RBP6.26□□□□□ -1.41
SMG8-205ENST00000580798 DSC3Q14574 896 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 TIGD5Q53EQ6 642 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 TCERG1LQ5VWI1 586 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 HDXQ7Z353 690 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 HID1Q8IV36 788 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 PDZD8Q8NEN9 1154 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 GCM1Q9NP62 436 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 RTEL1Q9NZ71 1219 aa6.26□□□□□ -1.41
SMG8-205ENST00000580798 ZGLP1P0C6A0 271 aa6.25□□□□□ -1.41
SMG8-205ENST00000580798 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.25□□□□□ -1.41
SMG8-205ENST00000580798 LILRA2Q8N149 483 aa6.25□□□□□ -1.41
SMG8-205ENST00000580798 PIWIL2Q8TC59 973 aaKnown RBP6.25□□□□□ -1.41
SMG8-205ENST00000580798 DUSP15Q9H1R2 295 aaPredicted RBP6.25□□□□□ -1.41
SMG8-205ENST00000580798 PPM1HQ9ULR3 514 aa6.25□□□□□ -1.41
SMG8-205ENST00000580798 GNEQ9Y223 722 aaKnown RBP6.25□□□□□ -1.41
SMG8-205ENST00000580798 KCTD3Q9Y597 815 aa6.25□□□□□ -1.41
SMG8-205ENST00000580798 TREHO43280 583 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 CELA3AP09093 270 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 MAPK1P28482 360 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 TPP2P29144 1249 aaPredicted RBP6.24□□□□□ -1.41
SMG8-205ENST00000580798 CDK8P49336 464 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 ENOX2Q16206 610 aaKnown RBP6.24□□□□□ -1.41
SMG8-205ENST00000580798 SKOR2Q2VWA4 1001 aaPredicted RBP6.24□□□□□ -1.41
SMG8-205ENST00000580798 GAB4Q2WGN9 574 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 ZNF385BQ569K4 471 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 GGNQ86UU5 652 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 CXorf38Q8TB03 319 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 GAL3ST3Q96A11 431 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 INTS4Q96HW7 963 aaKnown RBP6.24□□□□□ -1.41
SMG8-205ENST00000580798 Q96M66 194 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 SGPP1Q9BX95 441 aa6.24□□□□□ -1.41
SMG8-205ENST00000580798 ZNF552Q9H707 407 aaPredicted RBP6.24□□□□□ -1.41
SMG8-205ENST00000580798 TEX51A0A1B0GUA7 166 aa6.23□□□□□ -1.41
SMG8-205ENST00000580798 NFKB2Q00653 900 aa6.23□□□□□ -1.41
SMG8-205ENST00000580798 PLCB3Q01970 1234 aa6.23□□□□□ -1.41
SMG8-205ENST00000580798 WIPI1Q5MNZ9 446 aaPredicted RBP6.23□□□□□ -1.41
SMG8-205ENST00000580798 XYLT2Q9H1B5 865 aa6.23□□□□□ -1.41
SMG8-205ENST00000580798 CWC22Q9HCG8 908 aaKnown RBP6.23□□□□□ -1.41
SMG8-205ENST00000580798 SNCAIPQ9Y6H5 919 aa6.23□□□□□ -1.41
SMG8-205ENST00000580798 GRK4P32298 578 aa6.22□□□□□ -1.41
SMG8-205ENST00000580798 SSPNQ14714 243 aa6.22□□□□□ -1.41
SMG8-205ENST00000580798 NR0B2Q15466 257 aa6.22□□□□□ -1.41
SMG8-205ENST00000580798 TMEM132EQ6IEE7 984 aa6.22□□□□□ -1.41
SMG8-205ENST00000580798 OXR1Q8N573 874 aa6.22□□□□□ -1.41
SMG8-205ENST00000580798 ANKRD24Q8TF21 1146 aa6.22□□□□□ -1.41
SMG8-205ENST00000580798 OSBPL7Q9BZF2 842 aa6.22□□□□□ -1.41
SMG8-205ENST00000580798 YBX2Q9Y2T7 364 aaKnown RBP6.22□□□□□ -1.41
SMG8-205ENST00000580798 FITM1A5D6W6 292 aa6.21□□□□□ -1.42
SMG8-205ENST00000580798 BRD1O95696 1058 aa6.21□□□□□ -1.42
SMG8-205ENST00000580798 EGR3Q06889 387 aa6.21□□□□□ -1.42
SMG8-205ENST00000580798 PRRT2Q7Z6L0 340 aaPredicted RBP6.21□□□□□ -1.42
SMG8-205ENST00000580798 SETDB2Q96T68 719 aa6.21□□□□□ -1.42
SMG8-205ENST00000580798 DPH2Q9BQC3 489 aaPredicted RBP6.21□□□□□ -1.42
SMG8-205ENST00000580798 SRCIN1Q9C0H9 1055 aa6.21□□□□□ -1.42
SMG8-205ENST00000580798 DUSP13Q9UII6 198 aa6.21□□□□□ -1.42
SMG8-205ENST00000580798 OTOL1A6NHN0 477 aaPredicted RBP6.2□□□□□ -1.42
SMG8-205ENST00000580798 RFXAPO00287 272 aa6.2□□□□□ -1.42
SMG8-205ENST00000580798 TMEM151BQ8IW70 566 aa6.2□□□□□ -1.42
SMG8-205ENST00000580798 PANK1Q8TE04 598 aa6.2□□□□□ -1.42
SMG8-205ENST00000580798 TRIT1Q9H3H1 467 aaKnown RBP6.2□□□□□ -1.42
SMG8-205ENST00000580798 PDE6BP35913 854 aa6.19□□□□□ -1.42
SMG8-205ENST00000580798 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMG8-205ENST00000580798 GPATCH2Q9NW75 528 aa6.19□□□□□ -1.42
SMG8-205ENST00000580798 TJP2Q9UDY2 1190 aa6.19□□□□□ -1.42
SMG8-205ENST00000580798 HMGB1P09429 215 aaKnown RBP6.18□□□□□ -1.42
SMG8-205ENST00000580798 PI3P19957 117 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 ETV3P41162 512 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 MAPK8P45983 427 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 GALK1P51570 392 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 TSPYL5Q86VY4 417 aaPredicted RBP6.18□□□□□ -1.42
SMG8-205ENST00000580798 MRPL41Q8IXM3 137 aaKnown RBP6.18□□□□□ -1.42
SMG8-205ENST00000580798 DNAJB8Q8NHS0 232 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 FBF1Q8TES7 1133 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 SHISA4Q96DD7 197 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 GPR62Q9BZJ7 368 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 EBF1Q9UH73 591 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 GPR160Q9UJ42 338 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 PCDHA11Q9Y5I1 949 aa6.18□□□□□ -1.42
SMG8-205ENST00000580798 GFRA2O00451 464 aa6.17□□□□□ -1.42
SMG8-205ENST00000580798 SASH1O94885 1247 aa6.17□□□□□ -1.42
SMG8-205ENST00000580798 CELA3BP08861 270 aa6.17□□□□□ -1.42
SMG8-205ENST00000580798 DHX38Q92620 1227 aaKnown RBP6.17□□□□□ -1.42
SMG8-205ENST00000580798 PSPNO60542 156 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms