RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 STX8Q9UNK0 236 aa13.8□□□□□ -0.2
SNORD3C-201ENST00000580533 DOCK1Q14185 1865 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 CCDC69A6NI79 296 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 PTPRAP18433 802 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 INPP5BP32019 993 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 LIFRP42702 1097 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 MCM2P49736 904 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 APLP1P51693 650 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 EVX2Q03828 476 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 ADCK5Q3MIX3 580 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 KAT14Q9H8E8 782 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 GOPCQ9HD26 462 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 MTMR4Q9NYA4 1195 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 TNKSO95271 1327 aa13.79□□□□□ -0.2
SNORD3C-201ENST00000580533 IGKV6D-41A0A0C4DH26 115 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 SMIM22K7EJ46 135 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 CALM1P0DP23 149 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 CALM2P0DP24 149 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 CALM3P0DP25 149 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 ZBTB48P10074 688 aaPredicted RBP13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 TOP1P11387 765 aaKnown RBP13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 NEK4P51957 841 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 ATP2B2Q01814 1243 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 PPIL2Q13356 520 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 SEPT2Q15019 361 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 CST9Q5W186 159 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 DLK2Q6UY11 383 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 FBXL16Q8N461 479 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 ZNF280CQ8ND82 737 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 CEP95Q96GE4 821 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 WDR18Q9BV38 432 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 ALDH8A1Q9H2A2 487 aaPredicted RBP13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 INCENPQ9NQS7 918 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 SNCAIPQ9Y6H5 919 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 TLL2Q9Y6L7 1015 aa13.78□□□□□ -0.2
SNORD3C-201ENST00000580533 C19orf81C9J6K1 198 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 USP17L10C9JJH3 530 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 EXOSC10Q01780 885 aaKnown RBP13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 SAPCD2Q86UD0 394 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 ELP3Q9H9T3 547 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 TMOD4Q9NZQ9 345 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 CLIP2Q9UDT6 1046 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 TAF6LQ9Y6J9 622 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 ZHX2Q9Y6X8 837 aa13.77□□□□□ -0.21
SNORD3C-201ENST00000580533 SH2B2O14492 632 aaPredicted RBP13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 CXCL11O14625 94 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 EEF2P13639 858 aaKnown RBP13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 ZNF157P51786 506 aaPredicted RBP13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 RCAN1P53805 252 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 RGMBQ6NW40 437 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 Q6ZUG5 572 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 CYB5R4Q7L1T6 521 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 LPAR1Q92633 364 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 MKL1Q969V6 931 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 OPTNQ96CV9 577 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 OTUD5Q96G74 571 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 TACC3Q9Y6A5 838 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 ATAD5Q96QE3 1844 aa13.76□□□□□ -0.21
SNORD3C-201ENST00000580533 DDAH1O94760 285 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 KIF5BP33176 963 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 ECE1P42892 770 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 NOVP48745 357 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 GTF2A2P52657 109 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 ANTXR2P58335 489 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 PABPC4Q13310 644 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 SNAPC2Q13487 334 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 RRP1BQ14684 758 aaKnown RBP13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 MOB2Q70IA6 237 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 FASTKD5Q7L8L6 764 aaKnown RBP13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 CHST3Q7LGC8 479 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 SGMS1Q86VZ5 419 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 GMCL1P1Q8NEA9 526 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 KIAA1683Q9H0B3 1180 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 IL17RBQ9NRM6 502 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 FZD1Q9UP38 647 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 TMX2Q9Y320 296 aa13.75□□□□□ -0.21
SNORD3C-201ENST00000580533 OTOFQ9HC10 1997 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 SLURP2P0DP57 97 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 GUCY1A2P33402 732 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms