RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 TGM1P22735 817 aa4.89□□□□□ -1.63
KPNB1-208ENST00000580019 KCNC1P48547 511 aa4.89□□□□□ -1.63
KPNB1-208ENST00000580019 CPZQ66K79 652 aa4.89□□□□□ -1.63
KPNB1-208ENST00000580019 ZFPM1Q8IX07 1006 aa4.89□□□□□ -1.63
KPNB1-208ENST00000580019 ZMIZ1Q9ULJ6 1067 aa4.89□□□□□ -1.63
KPNB1-208ENST00000580019 TTBK1Q5TCY1 1321 aaPredicted RBP4.89□□□□□ -1.63
KPNB1-208ENST00000580019 FANCGO15287 622 aa4.88□□□□□ -1.63
KPNB1-208ENST00000580019 HSP90B1P14625 803 aaKnown RBP4.88□□□□□ -1.63
KPNB1-208ENST00000580019 FAAP100Q0VG06 881 aa4.88□□□□□ -1.63
KPNB1-208ENST00000580019 ELOAQ14241 798 aaKnown RBP4.88□□□□□ -1.63
KPNB1-208ENST00000580019 FAM129CQ86XR2 697 aa4.88□□□□□ -1.63
KPNB1-208ENST00000580019 SPPL2CQ8IUH8 684 aa4.88□□□□□ -1.63
KPNB1-208ENST00000580019 DHX38Q92620 1227 aaKnown RBP4.88□□□□□ -1.63
KPNB1-208ENST00000580019 GPR160Q9UJ42 338 aa4.88□□□□□ -1.63
KPNB1-208ENST00000580019 MPSTP25325 297 aa4.87□□□□□ -1.63
KPNB1-208ENST00000580019 ACVRL1P37023 503 aa4.87□□□□□ -1.63
KPNB1-208ENST00000580019 KIR3DL1P43629 444 aa4.87□□□□□ -1.63
KPNB1-208ENST00000580019 PPP2R3AQ06190 1150 aa4.87□□□□□ -1.63
KPNB1-208ENST00000580019 ZNF746Q6NUN9 644 aaPredicted RBP4.87□□□□□ -1.63
KPNB1-208ENST00000580019 TMEFF1Q8IYR6 380 aa4.87□□□□□ -1.63
KPNB1-208ENST00000580019 TP53I13Q8NBR0 393 aaPredicted RBP4.87□□□□□ -1.63
KPNB1-208ENST00000580019 COX4I2Q96KJ9 171 aa4.87□□□□□ -1.63
KPNB1-208ENST00000580019 NECAB3Q96P71 396 aaPredicted RBP4.87□□□□□ -1.63
KPNB1-208ENST00000580019 CSADQ9Y600 493 aa4.87□□□□□ -1.63
KPNB1-208ENST00000580019 CHRNEQ04844 493 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 TNK2Q07912 1038 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 AAMPQ13685 434 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 CFAP70Q5T0N1 1121 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 STK32AQ8WU08 396 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 VWCEQ96DN2 955 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 ACSBG1Q96GR2 724 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 MIPEPQ99797 713 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 CNTD2Q9H8S5 307 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 ABCB6Q9NP58 842 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 ABCC9O60706 1549 aa4.86□□□□□ -1.63
KPNB1-208ENST00000580019 CDK11BP21127 795 aaKnown RBP4.85□□□□□ -1.63
KPNB1-208ENST00000580019 ADGRF1Q5T601 910 aa4.85□□□□□ -1.63
KPNB1-208ENST00000580019 ZBTB37Q5TC79 503 aa4.85□□□□□ -1.63
KPNB1-208ENST00000580019 USP51Q70EK9 711 aa4.85□□□□□ -1.63
KPNB1-208ENST00000580019 PIWIL2Q8TC59 973 aaKnown RBP4.85□□□□□ -1.63
KPNB1-208ENST00000580019 GPBAR1Q8TDU6 330 aa4.85□□□□□ -1.63
KPNB1-208ENST00000580019 ZNF428Q96B54 188 aa4.85□□□□□ -1.63
KPNB1-208ENST00000580019 PWWP2AQ96N64 755 aa4.85□□□□□ -1.63
KPNB1-208ENST00000580019 CDK11AQ9UQ88 783 aaPredicted RBP4.85□□□□□ -1.63
KPNB1-208ENST00000580019 CYP7A1P22680 504 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 SLURP1P55000 103 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 RING1Q06587 406 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 KCNA1Q09470 495 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 MAP1SQ66K74 1059 aaPredicted RBP4.84□□□□□ -1.63
KPNB1-208ENST00000580019 PRPF40BQ6NWY9 871 aaKnown RBP4.84□□□□□ -1.63
KPNB1-208ENST00000580019 SULF2Q8IWU5 870 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 MZB1Q8WU39 189 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 CLP1Q92989 425 aaKnown RBP4.84□□□□□ -1.63
KPNB1-208ENST00000580019 SYTL4Q96C24 671 aaPredicted RBP4.84□□□□□ -1.63
KPNB1-208ENST00000580019 C1QTNF3Q9BXJ4 246 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 TMEM39AQ9NV64 488 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 USP40Q9NVE5 1235 aa4.84□□□□□ -1.63
KPNB1-208ENST00000580019 TMEM238LA0A1B0GVL6 79 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 BRD1O95696 1058 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 ITGB3P05106 788 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 ZNF20P17024 532 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 ARNTP27540 789 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 TPP2P29144 1249 aaPredicted RBP4.83□□□□□ -1.64
KPNB1-208ENST00000580019 VIPR1P32241 457 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 EGR3Q06889 387 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 GAB4Q2WGN9 574 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 FERMT3Q86UX7 667 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 GJD3Q8N144 294 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 Q8N1X5 172 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 ZNF507Q8TCN5 953 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 SHISA4Q96DD7 197 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 PUS7Q96PZ0 661 aaKnown RBP4.83□□□□□ -1.64
KPNB1-208ENST00000580019 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
KPNB1-208ENST00000580019 GPN3Q9UHW5 284 aaPredicted RBP4.83□□□□□ -1.64
KPNB1-208ENST00000580019 DCDC2CA8MYV0 355 aa4.82□□□□□ -1.64
KPNB1-208ENST00000580019 CDR1P51861 262 aa4.82□□□□□ -1.64
KPNB1-208ENST00000580019 PLCB3Q01970 1234 aa4.82□□□□□ -1.64
KPNB1-208ENST00000580019 OLFML2BQ68BL8 750 aa4.82□□□□□ -1.64
KPNB1-208ENST00000580019 C12orf40Q86WS4 652 aa4.82□□□□□ -1.64
KPNB1-208ENST00000580019 MFSD2AQ8NA29 543 aa4.82□□□□□ -1.64
KPNB1-208ENST00000580019 EMILIN2Q9BXX0 1053 aa4.82□□□□□ -1.64
KPNB1-208ENST00000580019 WASH4PA8MWX3 477 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 FZD7O75084 574 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 GALK1P51570 392 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 CAP1Q01518 475 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 LETMD1Q6P1Q0 360 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 TTC9BQ8N6N2 239 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 ANKS4BQ8N8V4 417 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 STK35Q8TDR2 534 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 TRIT1Q9H3H1 467 aaKnown RBP4.81□□□□□ -1.64
KPNB1-208ENST00000580019 USP35Q9P2H5 1018 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 DUSP13Q9UII6 198 aa4.81□□□□□ -1.64
KPNB1-208ENST00000580019 FFAR3O14843 346 aa4.8□□□□□ -1.64
KPNB1-208ENST00000580019 DUSP4Q13115 394 aa4.8□□□□□ -1.64
KPNB1-208ENST00000580019 CCDC27Q2M243 656 aa4.8□□□□□ -1.64
KPNB1-208ENST00000580019 CRIP3Q6Q6R5 217 aa4.8□□□□□ -1.64
KPNB1-208ENST00000580019 RIN3Q8TB24 985 aa4.8□□□□□ -1.64
KPNB1-208ENST00000580019 CACNA2D2Q9NY47 1150 aa4.8□□□□□ -1.64
KPNB1-208ENST00000580019 ZNF252P-AS1Q0IIN9 211 aa4.79□□□□□ -1.64
KPNB1-208ENST00000580019 HNRNPA0Q13151 305 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms