RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 CHRNDQ07001 517 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 MFSD14BQ5SR56 506 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 HHIPL2Q6UWX4 724 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 ATF7IPQ6VMQ6 1270 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 TXNRD3Q86VQ6 643 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 ARRDC4Q8NCT1 418 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 HERVK_113Q902F9 699 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 ZKSCAN4Q969J2 545 aaPredicted RBP4.19□□□□□ -1.74
CDH19-204ENST00000579658 TIFAQ96CG3 184 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 RNPC3Q96LT9 517 aaKnown RBP4.19□□□□□ -1.74
CDH19-204ENST00000579658 PHOX2BQ99453 314 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 MEIS3Q99687 375 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 APBA2Q99767 749 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 PRRX2Q99811 253 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 GJD2Q9UKL4 321 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 PTPRCP08575 1304 aa4.19□□□□□ -1.74
CDH19-204ENST00000579658 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.18□□□□□ -1.74
CDH19-204ENST00000579658 ANKRD18BA2A2Z9 1011 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 F8W031 263 aaPredicted RBP4.18□□□□□ -1.74
CDH19-204ENST00000579658 DNAJB2P25686 324 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 AAMPQ13685 434 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 UBE4AQ14139 1066 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 MFSD14CQ5VZR4 134 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 ZKSCAN2Q63HK3 967 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 LPAR1Q92633 364 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 ZNF594Q96JF6 807 aaPredicted RBP4.18□□□□□ -1.74
CDH19-204ENST00000579658 MTIF3Q9H2K0 278 aaKnown RBP4.18□□□□□ -1.74
CDH19-204ENST00000579658 ZNF576Q9H609 170 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 GREM2Q9H772 168 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 POLR3EQ9NVU0 708 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 IVNS1ABPQ9Y6Y0 642 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 UTYO14607 1347 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 HTTP42858 3142 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 KBTBD13C9JR72 458 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 SNAP23O00161 211 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 GRM8O00222 908 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 ERC2O15083 957 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 ALDH1L1O75891 902 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 CSF1RP07333 972 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 CYP2C8P10632 490 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 LMBR1LQ6UX01 489 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 GADL1Q6ZQY3 521 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 ANKRD44Q8N8A2 993 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 USP38Q8NB14 1042 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 KLHDC4Q8TBB5 520 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 TRIB2Q92519 343 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 ARHGAP45Q92619 1136 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 API5Q9BZZ5 524 aaKnown RBP4.18□□□□□ -1.74
CDH19-204ENST00000579658 C9orf78Q9NZ63 289 aaPredicted RBP4.18□□□□□ -1.74
CDH19-204ENST00000579658 TRPC6Q9Y210 931 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 AFG3L2Q9Y4W6 797 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.18□□□□□ -1.74
CDH19-204ENST00000579658 KIF16BQ96L93 1317 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 MYH13Q9UKX3 1938 aa4.18□□□□□ -1.74
CDH19-204ENST00000579658 PI4K2BG5E9Z4 385 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 CTNND1O60716 968 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 MAP4K4O95819 1239 aaPredicted RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 HMGB1P09429 215 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 BMP1P13497 986 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 POU3F3P20264 500 aaPredicted RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 ITGA6P23229 1130 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 RRP1P56182 461 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 GRIN2CQ14957 1233 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 CNPY4Q8N129 248 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 PUS3Q9BZE2 481 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 IRF2BPLQ9H1B7 796 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 BICC1Q9H694 974 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 GDPD2Q9HCC8 539 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 GINM1Q9NU53 330 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 DDX20Q9UHI6 824 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 MSRAQ9UJ68 235 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 TACC3Q9Y6A5 838 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 SMIM22K7EJ46 135 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 KIAA0355O15063 1070 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 ENTPD3O75355 529 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 PTPRAP18433 802 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 HIBADHP31937 336 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 INPP5BP32019 993 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 MAP3K10Q02779 954 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 FPGSQ05932 587 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 PKN1Q16512 942 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 ANKRD13CQ8N6S4 541 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.17□□□□□ -1.74
CDH19-204ENST00000579658 SENP6Q9GZR1 1112 aaPredicted RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 AS3MTQ9HBK9 375 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 CHMP3Q9Y3E7 222 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 PCDHAC2Q9Y5I4 1007 aa4.17□□□□□ -1.74
CDH19-204ENST00000579658 LRRFIP2Q9Y608 721 aaKnown RBP4.17□□□□□ -1.74
CDH19-204ENST00000579658 ATAD5Q96QE3 1844 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 GRXCR2A6NFK2 248 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 IPO8O15397 1037 aaKnown RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 MAP3K13O43283 966 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 BRD1O95696 1058 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 ALADP13716 330 aa4.16□□□□□ -1.74
CDH19-204ENST00000579658 DEKP35659 375 aaKnown RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 ANP32AP39687 249 aaKnown RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 CACNB2Q08289 660 aaPredicted RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 PPIGQ13427 754 aaKnown RBP eCLIP4.16□□□□□ -1.74
CDH19-204ENST00000579658 SKIV2LQ15477 1246 aaKnown RBP4.16□□□□□ -1.74
CDH19-204ENST00000579658 PPP1R15BQ5SWA1 713 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms