RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 GDF11O95390 407 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 CALM1P0DP23 149 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 CALM2P0DP24 149 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 CALM3P0DP25 149 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 FKBP1BP68106 108 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 ICA1Q05084 483 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 SEPT2Q15019 361 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 MAP3K11Q16584 847 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 RCSD1Q6JBY9 416 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 ARMC9Q7Z3E5 817 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 SCYL3Q8IZE3 742 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 MKL1Q969V6 931 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 PICK1Q9NRD5 415 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 TPCN1Q9ULQ1 816 aa12.34□□□□□ -0.43
CDK5RAP3-214ENST00000579632 ZBTB43O43298 467 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 DDAH1O94760 285 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 YY1P25490 414 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 INPP5BP32019 993 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 GUCY1A2P33402 732 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 APOA5Q6Q788 366 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 MAP3K14Q99558 947 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 SH2D4AQ9H788 454 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ARHGEF10LQ9HCE6 1279 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 BRPF3Q9ULD4 1205 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 CSADQ9Y600 493 aa12.33□□□□□ -0.44
CDK5RAP3-214ENST00000579632 NAV1Q8NEY1 1877 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 SSC5DA1L4H1 1573 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 TRAF5O00463 557 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 KIF3CO14782 793 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 JAG1P78504 1218 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 TTLL12Q14166 644 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ME3Q16798 604 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 DLK2Q6UY11 383 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 NOL8Q76FK4 1167 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ZNF654Q8IZM8 581 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 PNMA1Q8ND90 353 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 SENP2Q9HC62 589 aa12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-214ENST00000579632 PFKFB2O60825 505 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 PTPRAP18433 802 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 KIF5BP33176 963 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 METAP2P50579 478 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 TROAPQ12815 778 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 CUL4AQ13619 759 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 PRKG1Q13976 671 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 SIAH1Q8IUQ4 282 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 C2orf69Q8N8R5 385 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 GMCL1P1Q8NEA9 526 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ZKSCAN4Q969J2 545 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 IPO9Q96P70 1041 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 WDR18Q9BV38 432 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 AS3MTQ9HBK9 375 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 TMX2Q9Y320 296 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 FOCADQ5VW36 1801 aa12.31□□□□□ -0.44
CDK5RAP3-214ENST00000579632 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 TOMM70O94826 608 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 CELF2O95319 508 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 VGLL4Q14135 290 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 LDLRAD1Q5T700 205 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 CPLX2Q6PUV4 134 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 FANCBQ8NB91 859 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ZNF408Q9H9D4 720 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 HPS5Q9UPZ3 1129 aa12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-214ENST00000579632 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms