RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 TMEM57Q8N5G2 664 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 EDC3Q96F86 508 aaKnown RBP10.45□□□□□ -0.74
CASC3-206ENST00000579238 FEZ1Q99689 392 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 EHD4Q9H223 541 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 DBNLQ9UJU6 430 aaKnown RBP10.45□□□□□ -0.74
CASC3-206ENST00000579238 STXBP5LQ9Y2K9 1186 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 CDK5RAP2Q96SN8 1893 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 CNMDO75829 334 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 IDH1O75874 414 aaKnown RBP10.44□□□□□ -0.74
CASC3-206ENST00000579238 USP5P45974 858 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 USP14P54578 494 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 ZYXQ15942 572 aaKnown RBP10.44□□□□□ -0.74
CASC3-206ENST00000579238 LRRC26Q2I0M4 334 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 MFSD14CQ5VZR4 134 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 TMED8Q6PL24 325 aaPredicted RBP10.44□□□□□ -0.74
CASC3-206ENST00000579238 LBX2Q6XYB7 198 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 CATSPERGQ6ZRH7 1159 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 Q7L0L9 218 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 KIAA1683Q9H0B3 1180 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 MTMR10Q9NXD2 777 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 SERPINB13Q9UIV8 391 aa10.44□□□□□ -0.74
CASC3-206ENST00000579238 NOP58Q9Y2X3 529 aaKnown RBP10.44□□□□□ -0.74
CASC3-206ENST00000579238 SLC15A5A6NIM6 579 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 CCER2I3L3R5 266 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 MSCO60682 206 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 HOXC6P09630 235 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 PTPREP23469 700 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 RAB3GAP1Q15042 981 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 CERKLQ49MI3 558 aaPredicted RBP10.43□□□□□ -0.74
CASC3-206ENST00000579238 ZKSCAN2Q63HK3 967 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 MAGEB6Q8N7X4 407 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 MIGA1Q8NAN2 632 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 CCDC8Q9H0W5 538 aaPredicted RBP10.43□□□□□ -0.74
CASC3-206ENST00000579238 TLR7Q9NYK1 1049 aaKnown RBP10.43□□□□□ -0.74
CASC3-206ENST00000579238 FLRT1Q9NZU1 646 aa10.43□□□□□ -0.74
CASC3-206ENST00000579238 VCAM1P19320 739 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
CASC3-206ENST00000579238 ATP2B2Q01814 1243 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 MAP3K12Q12852 859 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 GRB14Q14449 540 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 ABCB5Q2M3G0 1257 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 WDR78Q5VTH9 848 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 ACER1Q8TDN7 264 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 LPAR1Q92633 364 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 EAF2Q96CJ1 260 aaPredicted RBP10.42□□□□□ -0.74
CASC3-206ENST00000579238 SENP6Q9GZR1 1112 aaPredicted RBP10.42□□□□□ -0.74
CASC3-206ENST00000579238 C1orf115Q9H7X2 142 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 CABP5Q9NP86 173 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 DDX20Q9UHI6 824 aaKnown RBP10.42□□□□□ -0.74
CASC3-206ENST00000579238 IVNS1ABPQ9Y6Y0 642 aa10.42□□□□□ -0.74
CASC3-206ENST00000579238 MYO5AQ9Y4I1 1855 aaKnown RBP10.42□□□□□ -0.74
CASC3-206ENST00000579238 A0A0C4DFX4 3053 aa10.41□□□□□ -0.74
CASC3-206ENST00000579238 SPDYE16A6NNV3 312 aaPredicted RBP10.41□□□□□ -0.74
CASC3-206ENST00000579238 DNM1LO00429 736 aa10.41□□□□□ -0.74
CASC3-206ENST00000579238 SHMT1P34896 483 aa10.41□□□□□ -0.74
CASC3-206ENST00000579238 NPLOC4Q8TAT6 608 aa10.41□□□□□ -0.74
CASC3-206ENST00000579238 LBHD1Q9BQE6 289 aaPredicted RBP10.41□□□□□ -0.74
CASC3-206ENST00000579238 RPAP3Q9H6T3 665 aaPredicted RBP10.41□□□□□ -0.74
CASC3-206ENST00000579238 BTBD7Q9P203 1132 aa10.41□□□□□ -0.74
CASC3-206ENST00000579238 NDUFB9Q9Y6M9 179 aa10.41□□□□□ -0.74
CASC3-206ENST00000579238 MYH1P12882 1939 aa10.41□□□□□ -0.74
CASC3-206ENST00000579238 IGHA2P01877 340 aa10.4□□□□□ -0.74
CASC3-206ENST00000579238 CNGA1P29973 690 aa10.4□□□□□ -0.74
CASC3-206ENST00000579238 CYP2C19P33261 490 aa10.4□□□□□ -0.74
CASC3-206ENST00000579238 GUCY1A2P33402 732 aa10.4□□□□□ -0.74
CASC3-206ENST00000579238 PLCD1P51178 756 aa10.4□□□□□ -0.74
CASC3-206ENST00000579238 GABPAQ06546 454 aa10.4□□□□□ -0.74
CASC3-206ENST00000579238 FAM109BQ6ICB4 259 aaPredicted RBP10.4□□□□□ -0.74
CASC3-206ENST00000579238 FTSJ3Q8IY81 847 aaKnown RBP10.4□□□□□ -0.74
CASC3-206ENST00000579238 RIOK1Q9BRS2 568 aaKnown RBP10.4□□□□□ -0.74
CASC3-206ENST00000579238 ANTXR1Q9H6X2 564 aa10.4□□□□□ -0.74
CASC3-206ENST00000579238 POTEB2H3BUK9 544 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 STRNO43815 780 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 POLR3DP05423 398 aaPredicted RBP10.39□□□□□ -0.75
CASC3-206ENST00000579238 CYBAP13498 195 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 COG2Q14746 738 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 SEPT2Q15019 361 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 OLFML2BQ68BL8 750 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 DPP9Q86TI2 863 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 ERC1Q8IUD2 1116 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 ITPRIPQ8IWB1 547 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 TRPV1Q8NER1 839 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 HOXC10Q9NYD6 342 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 PRKAG2Q9UGJ0 569 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 FRMPD3Q5JV73 1810 aa10.39□□□□□ -0.75
CASC3-206ENST00000579238 MAGEB6P1A0A0J9YX57 407 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 ADORA2AP29274 412 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 ATN1P54259 1190 aaPredicted RBP10.38□□□□□ -0.75
CASC3-206ENST00000579238 RTP1P59025 263 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 TTF1Q15361 905 aaPredicted RBP10.38□□□□□ -0.75
CASC3-206ENST00000579238 CEP85Q6P2H3 762 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 AACSQ86V21 672 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 MB21D1Q8N884 522 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 ARRDC4Q8NCT1 418 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 SHCBP1Q8NEM2 672 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 MOV10L1Q9BXT6 1211 aaKnown RBP10.38□□□□□ -0.75
CASC3-206ENST00000579238 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
CASC3-206ENST00000579238 SPATC1LQ9H0A9 340 aa10.38□□□□□ -0.75
CASC3-206ENST00000579238 MCM9Q9NXL9 1143 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms