RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	FOCAD	Q5VW36	1801 aa		4.81	□□□□□ -1.64
SMARCE1-215	ENST00000578995	MAST2	Q6P0Q8	1798 aa		4.81	□□□□□ -1.64
SMARCE1-215	ENST00000578995	POLR2A	P24928	1970 aa	Known RBP	4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	IRS2	Q9Y4H2	1338 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	GRM8	O00222	908 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	ZBTB7B	O15156	539 aa	Predicted RBP	4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	EFS	O43281	561 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PLIN1	O60240	522 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	HCLS1	P14317	486 aa	Predicted RBP	4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	POLD1	P28340	1107 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	ADH7	P40394	386 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	RFX5	P48382	616 aa	Predicted RBP	4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PRELP	P51888	382 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	TGFB2	P61812	414 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	TLR1	Q15399	786 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	ZKSCAN2	Q63HK3	967 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	OGFOD2	Q6N063	350 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	TPTE2	Q6XPS3	522 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	TMEM57	Q8N5G2	664 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	SUCLG2	Q96I99	432 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	MEIS3	Q99687	375 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	UTP14A	Q9BVJ6	771 aa	Known RBP	4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	API5	Q9BZZ5	524 aa	Known RBP	4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	SRCIN1	Q9C0H9	1055 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	NYX	Q9GZU5	481 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	SCN4A	P35499	1836 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995	WDR90	Q96KV7	1748 aa		4.8	□□□□□ -1.64
SMARCE1-215	ENST00000578995		A0A0G2JLW4	131 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	FAM177B	A6PVY3	158 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	IRS4	O14654	1257 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	CCT4	P50991	539 aa	Known RBP	4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	RRP1	P56182	461 aa	Known RBP	4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	CTSW	P56202	376 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	MTX1	Q13505	466 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	FBLN7	Q53RD9	439 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	STYK1	Q6J9G0	422 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	UBE3B	Q7Z3V4	1068 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PPP1R42	Q7Z4L9	355 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	TTLL11	Q8NHH1	800 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PANK1	Q8TE04	598 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	CLUAP1	Q96AJ1	413 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	CRAMP1	Q96RY5	1269 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	ZIC5	Q96T25	663 aa		4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	NIFK	Q9BYG3	293 aa	Known RBP	4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	TRMT112	Q9UI30	125 aa	Known RBP	4.79	□□□□□ -1.64
SMARCE1-215	ENST00000578995	LAMB1	P07942	1786 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PAPPA2	Q9BXP8	1791 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	MYH2	Q9UKX2	1941 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	NFKBIE	O00221	500 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PDE8A	O60658	829 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	ZMYND10	O75800	440 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	AP1G2	O75843	785 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	MED26	O95402	600 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PDE6B	P35913	854 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	IREB2	P48200	963 aa	Known RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	ST5	P78524	1137 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	NEXN	Q0ZGT2	675 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PDE3A	Q14432	1141 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	MVP	Q14764	893 aa	Known RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	PRPF40B	Q6NWY9	871 aa	Known RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	SLC4A10	Q6U841	1118 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	OLFM4	Q6UX06	510 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	C2CD5	Q86YS7	1000 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	SIRT2	Q8IXJ6	389 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	DZIP1L	Q8IYY4	767 aa	Known RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	POU5F2	Q8N7G0	328 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	FRAT1	Q92837	279 aa	Predicted RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	CELF1	Q92879	486 aa	Known RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	MASTL	Q96GX5	879 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	BICC1	Q9H694	974 aa	Known RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	GREM2	Q9H772	168 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	SEC31B	Q9NQW1	1179 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	ZBTB40	Q9NUA8	1239 aa		4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.78	□□□□□ -1.64
SMARCE1-215	ENST00000578995	LTBP3	Q9NS15	1303 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	WTIP	A6NIX2	430 aa	Predicted RBP	4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	TRIM66	O15016	1216 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	IPO8	O15397	1037 aa	Known RBP	4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	GSC2	O15499	205 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	NPR1	P16066	1061 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	NOS3	P29474	1203 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	LCE5A	Q5TCM9	118 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	NPM2	Q86SE8	214 aa	Known RBP	4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	VGLL2	Q8N8G2	317 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	ZDHHC3	Q9NYG2	299 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	COG6	Q9Y2V7	657 aa		4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	LRRFIP2	Q9Y608	721 aa	Known RBP	4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	DDX60L	Q5H9U9	1706 aa	Known RBP	4.77	□□□□□ -1.65
SMARCE1-215	ENST00000578995	COL1A1	P02452	1464 aa	Predicted RBP	4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	PNMA6E	A0A0J9YXQ4	647 aa		4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995		H0YIN7	160 aa		4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	ZNF609	O15014	1411 aa		4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	PTPN12	Q05209	780 aa	Known RBP	4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	GRAP	Q13588	217 aa		4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	CEP85	Q6P2H3	762 aa		4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	LMBR1L	Q6UX01	489 aa		4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	ATG9A	Q7Z3C6	839 aa		4.76	□□□□□ -1.65
SMARCE1-215	ENST00000578995	GRAPL	Q8TC17	118 aa	Predicted RBP	4.76	□□□□□ -1.65

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