RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 RHBDL3P58872 404 aa13.92□□□□□ -0.18
GGA3-206ENST00000578773 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
GGA3-206ENST00000578773 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
GGA3-206ENST00000578773 LENG1Q96BZ8 264 aaPredicted RBP13.92□□□□□ -0.18
GGA3-206ENST00000578773 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
GGA3-206ENST00000578773 TMEM39AQ9NV64 488 aa13.92□□□□□ -0.18
GGA3-206ENST00000578773 PARP14Q460N5 1801 aa13.92□□□□□ -0.18
GGA3-206ENST00000578773 NBPF7P0C2Y1 421 aaPredicted RBP13.91□□□□□ -0.18
GGA3-206ENST00000578773 MYOGP15173 224 aa13.91□□□□□ -0.18
GGA3-206ENST00000578773 GRB14Q14449 540 aa13.91□□□□□ -0.18
GGA3-206ENST00000578773 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
GGA3-206ENST00000578773 PUM3Q15397 648 aaKnown RBP13.91□□□□□ -0.18
GGA3-206ENST00000578773 SKIV2LQ15477 1246 aaKnown RBP13.91□□□□□ -0.18
GGA3-206ENST00000578773 EMILIN3Q9NT22 766 aa13.91□□□□□ -0.18
GGA3-206ENST00000578773 BTBD7Q9P203 1132 aa13.91□□□□□ -0.18
GGA3-206ENST00000578773 KIF16BQ96L93 1317 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 SLC15A5A6NIM6 579 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 ERC2O15083 957 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 HOXC6P09630 235 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 IFIT1P09914 478 aaKnown RBP13.9□□□□□ -0.18
GGA3-206ENST00000578773 PHKA1P46020 1223 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 RABGGTBP53611 331 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 DNAJC18Q9H819 358 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 TMOD4Q9NZQ9 345 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 PHF24Q9UPV7 400 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 SCN5AQ14524 2016 aa13.9□□□□□ -0.18
GGA3-206ENST00000578773 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.19
GGA3-206ENST00000578773 SPTBN4Q9H254 2564 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 A0A1W2PQ45 241 aaPredicted RBP13.89□□□□□ -0.19
GGA3-206ENST00000578773 A0A1W2PQY0 241 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 EPOPA6NHQ4 379 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 SEPT4O43236 478 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 GDF11O95390 407 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 CSF2RAP15509 400 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 FBXL18Q96ME1 805 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
GGA3-206ENST00000578773 MCM3APO60318 1980 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 SALL1Q9NSC2 1324 aa13.89□□□□□ -0.19
GGA3-206ENST00000578773 ZDBF2Q9HCK1 2354 aa13.88□□□□□ -0.19
GGA3-206ENST00000578773 MYH1P12882 1939 aa13.88□□□□□ -0.19
GGA3-206ENST00000578773 PGK1P00558 417 aa13.88□□□□□ -0.19
GGA3-206ENST00000578773 ZYXQ15942 572 aaKnown RBP13.88□□□□□ -0.19
GGA3-206ENST00000578773 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
GGA3-206ENST00000578773 TBX21Q9UL17 535 aa13.88□□□□□ -0.19
GGA3-206ENST00000578773 C5orf42Q9H799 3197 aa13.88□□□□□ -0.19
GGA3-206ENST00000578773 MROH7-TTC4A0A0A0MT08 1334 aa13.88□□□□□ -0.19
GGA3-206ENST00000578773 COBLO75128 1261 aa13.87□□□□□ -0.19
GGA3-206ENST00000578773 TIMP1P01033 207 aa13.87□□□□□ -0.19
GGA3-206ENST00000578773 SLC5A1P13866 664 aa13.87□□□□□ -0.19
GGA3-206ENST00000578773 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
GGA3-206ENST00000578773 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
GGA3-206ENST00000578773 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
GGA3-206ENST00000578773 UIMC1Q96RL1 719 aa13.87□□□□□ -0.19
GGA3-206ENST00000578773 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
GGA3-206ENST00000578773 TSPYL2Q9H2G4 693 aaPredicted RBP13.87□□□□□ -0.19
GGA3-206ENST00000578773 MTCH2Q9Y6C9 303 aa13.87□□□□□ -0.19
GGA3-206ENST00000578773 ADORA2AP29274 412 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 ADORA1P30542 326 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 AAK1Q2M2I8 961 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 CERS4Q9HA82 394 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 MSRAQ9UJ68 235 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
GGA3-206ENST00000578773 PRR33A8MZF0 331 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 TAL1P17542 331 aaPredicted RBP13.85□□□□□ -0.19
GGA3-206ENST00000578773 SLC4A10Q6U841 1118 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 ATG9AQ7Z3C6 839 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 DZIP1Q86YF9 867 aaKnown RBP13.85□□□□□ -0.19
GGA3-206ENST00000578773 LPIN2Q92539 896 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 SLC28A3Q9HAS3 691 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 XPNPEP3Q9NQH7 507 aa13.85□□□□□ -0.19
GGA3-206ENST00000578773 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
GGA3-206ENST00000578773 RFX5P48382 616 aaPredicted RBP13.84□□□□□ -0.19
GGA3-206ENST00000578773 MECOMQ03112 1051 aa13.84□□□□□ -0.19
GGA3-206ENST00000578773 RAB30Q15771 203 aa13.84□□□□□ -0.19
GGA3-206ENST00000578773 OLFML2BQ68BL8 750 aa13.84□□□□□ -0.19
GGA3-206ENST00000578773 ANKRD33Q7Z3H0 272 aa13.84□□□□□ -0.19
GGA3-206ENST00000578773 SPRED2Q7Z698 418 aa13.84□□□□□ -0.19
GGA3-206ENST00000578773 ABCF2Q9UG63 623 aa13.84□□□□□ -0.19
GGA3-206ENST00000578773 GPR75-ASB3A0A0A6YYF3 556 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 C19orf81C9J6K1 198 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 VAMP4O75379 141 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 GLRX3O76003 335 aaKnown RBP13.83□□□□□ -0.2
GGA3-206ENST00000578773 PPIGQ13427 754 aaKnown RBP eCLIP13.83□□□□□ -0.2
GGA3-206ENST00000578773 RASGRF1Q13972 1273 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 RALBP1Q15311 655 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 PPP2R2DQ66LE6 453 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 DPP9Q86TI2 863 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 HERVK_113Q902F9 699 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 FAM163AQ96GL9 167 aaPredicted RBP13.83□□□□□ -0.2
GGA3-206ENST00000578773 ZBTB21Q9ULJ3 1066 aa13.83□□□□□ -0.2
GGA3-206ENST00000578773 IVNS1ABPQ9Y6Y0 642 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms