RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 GSE1Q14687 1217 aa19.73■□□□□ 0.75
SREBF1-218ENST00000578469 KLHL40Q2TBA0 621 aa19.73■□□□□ 0.75
SREBF1-218ENST00000578469 TTC6Q86TZ1 520 aa19.73■□□□□ 0.75
SREBF1-218ENST00000578469 PGAP2Q9UHJ9 254 aa19.73■□□□□ 0.75
SREBF1-218ENST00000578469 MBD3O95983 291 aa19.72■□□□□ 0.75
SREBF1-218ENST00000578469 ADD1P35611 737 aaKnown RBP19.72■□□□□ 0.75
SREBF1-218ENST00000578469 KIAA0825Q8IV33 1275 aa19.72■□□□□ 0.75
SREBF1-218ENST00000578469 ENAHQ8N8S7 591 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-218ENST00000578469 TMEM87AQ8NBN3 555 aa19.72■□□□□ 0.75
SREBF1-218ENST00000578469 ZDHHC15Q96MV8 337 aa19.72■□□□□ 0.75
SREBF1-218ENST00000578469 MCOLN1Q9GZU1 580 aa19.72■□□□□ 0.75
SREBF1-218ENST00000578469 KCNQ5Q9NR82 932 aa19.72■□□□□ 0.75
SREBF1-218ENST00000578469 MYO3BQ8WXR4 1341 aa19.72■□□□□ 0.75
SREBF1-218ENST00000578469 DDAH1O94760 285 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 FDPSP14324 419 aaKnown RBP19.71■□□□□ 0.75
SREBF1-218ENST00000578469 RXRAP19793 462 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 CDC27P30260 824 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 KRT85P78386 507 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 TFAP4Q01664 338 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 SSRP1Q08945 709 aaKnown RBP19.71■□□□□ 0.75
SREBF1-218ENST00000578469 SLC4A8Q2Y0W8 1093 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 FAM47AQ5JRC9 791 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 FERMT3Q86UX7 667 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 CCDC144CPQ8IYA2 1237 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 NUP133Q8WUM0 1156 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 WASF1Q92558 559 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 DYNLL2Q96FJ2 89 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 C8orf76Q96K31 380 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 MYL10Q9BUA6 226 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 CNOT7Q9UIV1 285 aaKnown RBP19.71■□□□□ 0.75
SREBF1-218ENST00000578469 STK36Q9NRP7 1315 aa19.71■□□□□ 0.75
SREBF1-218ENST00000578469 IFNAR1P17181 557 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 PLCD1P51178 756 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 RBM5P52756 815 aaKnown RBP eCLIP19.7■□□□□ 0.742e-7■■■□□ 15
SREBF1-218ENST00000578469 EVX2Q03828 476 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 RESTQ13127 1097 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 CDC42EP5Q6NZY7 148 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 C16orf86Q6ZW13 317 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 MICALL2Q8IY33 904 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 TRIM22Q8IYM9 498 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 FANCBQ8NB91 859 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 TRPM4Q8TD43 1214 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 CHAMP1Q96JM3 812 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 RBM28Q9NW13 759 aaKnown RBP19.7■□□□□ 0.74
SREBF1-218ENST00000578469 SERPINA10Q9UK55 444 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 CNPY2Q9Y2B0 182 aa19.7■□□□□ 0.74
SREBF1-218ENST00000578469 TSPY3P0CV98 308 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 TSPY8P0CW00 308 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 FOSBP53539 338 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 HUNKP57058 714 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 DNM1Q05193 864 aaKnown RBP19.69■□□□□ 0.74
SREBF1-218ENST00000578469 PICALMQ13492 652 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 DGKZQ13574 1117 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 APOBEC3HQ6NTF7 200 aaKnown RBP19.69■□□□□ 0.74
SREBF1-218ENST00000578469 USP48Q86UV5 1035 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 DGKHQ86XP1 1220 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 FAM217BQ9NTX9 383 aaPredicted RBP19.69■□□□□ 0.74
SREBF1-218ENST00000578469 TCP11L1Q9NUJ3 509 aa19.69■□□□□ 0.74
SREBF1-218ENST00000578469 CASP8AP2Q9UKL3 1982 aa19.68■□□□□ 0.74
SREBF1-218ENST00000578469 WDHD1O75717 1129 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-218ENST00000578469 FMNL1O95466 1100 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-218ENST00000578469 CDK8P49336 464 aa19.68■□□□□ 0.74
SREBF1-218ENST00000578469 HIRAP54198 1017 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-218ENST00000578469 TRIM29Q14134 588 aa19.68■□□□□ 0.74
SREBF1-218ENST00000578469 NTRK3Q16288 839 aa19.68■□□□□ 0.74
SREBF1-218ENST00000578469 ANKS1AQ92625 1134 aa19.68■□□□□ 0.74
SREBF1-218ENST00000578469 ALG1Q9BT22 464 aa19.68■□□□□ 0.74
SREBF1-218ENST00000578469 CDK5RAP2Q96SN8 1893 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 YDJCA8MPS7 323 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 FIBPO43427 364 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 PPFIA3O75145 1194 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 HLA-DOAP06340 250 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 ATL3Q6DD88 541 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 RSBN1LQ6PCB5 846 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-218ENST00000578469 FBXO18Q8NFZ0 1043 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 DPF2Q92785 391 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 SLC26A6Q9BXS9 759 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 SCAND2PQ9GZW5 306 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-218ENST00000578469 GZF1Q9H116 711 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-218ENST00000578469 KAT14Q9H8E8 782 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 HDAC9Q9UKV0 1011 aa19.67■□□□□ 0.74
SREBF1-218ENST00000578469 DDX60LQ5H9U9 1706 aaKnown RBP19.66■□□□□ 0.74
SREBF1-218ENST00000578469 RASA1P20936 1047 aa19.66■□□□□ 0.74
SREBF1-218ENST00000578469 AKAP17AQ02040 695 aaKnown RBP19.66■□□□□ 0.74
SREBF1-218ENST00000578469 KRT26Q7Z3Y9 468 aa19.66■□□□□ 0.74
SREBF1-218ENST00000578469 CTCFLQ8NI51 663 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-218ENST00000578469 PHKBQ93100 1093 aa19.66■□□□□ 0.74
SREBF1-218ENST00000578469 ZNF396Q96N95 335 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-218ENST00000578469 OSBPL5Q9H0X9 879 aaPredicted RBP19.66■□□□□ 0.74
SREBF1-218ENST00000578469 GDPD2Q9HCC8 539 aa19.66■□□□□ 0.74
SREBF1-218ENST00000578469 SWAP70Q9UH65 585 aa19.66■□□□□ 0.74
SREBF1-218ENST00000578469 CFAP45Q9UL16 551 aa19.66■□□□□ 0.74
SREBF1-218ENST00000578469 FOCADQ5VW36 1801 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 MYH1P12882 1939 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 SCN9AQ15858 1988 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
SREBF1-218ENST00000578469 RPS12P25398 132 aaKnown RBP19.65■□□□□ 0.74
SREBF1-218ENST00000578469 UBE2HP62256 183 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 GUCY1B3Q02153 619 aa19.65■□□□□ 0.74
SREBF1-218ENST00000578469 CRACR2BQ8N4Y2 399 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms