RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 USP17L17D6RBQ6 530 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 USP17L19D6RCP7 530 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 USP17L20D6RJB6 530 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 HMMRO75330 724 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 POLR3DP05423 398 aaPredicted RBP17.55■□□□□ 0.4
ITGB4-204ENST00000578318 PDE6AP16499 860 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 USP17L24Q0WX57 530 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 Q3C1V9 767 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 MAP3K21Q5TCX8 1036 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 PLEKHH3Q7Z736 793 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 DIS3LQ8TF46 1054 aaKnown RBP17.55■□□□□ 0.4
ITGB4-204ENST00000578318 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
ITGB4-204ENST00000578318 KIAA1683Q9H0B3 1180 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 PORCNQ9H237 461 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
ITGB4-204ENST00000578318 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
ITGB4-204ENST00000578318 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
ITGB4-204ENST00000578318 SHMT1P34896 483 aa17.54■□□□□ 0.4
ITGB4-204ENST00000578318 RGS2P41220 211 aa17.54■□□□□ 0.4
ITGB4-204ENST00000578318 PLCD1P51178 756 aa17.54■□□□□ 0.4
ITGB4-204ENST00000578318 ZYXQ15942 572 aaKnown RBP17.54■□□□□ 0.4
ITGB4-204ENST00000578318 SLC9C2Q5TAH2 1124 aa17.54■□□□□ 0.4
ITGB4-204ENST00000578318 USP6NLQ92738 828 aa17.54■□□□□ 0.4
ITGB4-204ENST00000578318 RABGAP1Q9Y3P9 1069 aa17.54■□□□□ 0.4
ITGB4-204ENST00000578318 ZNF532Q9HCE3 1301 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 MYH8P13535 1937 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
ITGB4-204ENST00000578318 VCAM1P19320 739 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 CCNA1P78396 465 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 MORN1Q5T089 497 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 POTEEQ6S8J3 1075 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 DNAJC2Q99543 621 aaKnown RBP17.53■□□□□ 0.4
ITGB4-204ENST00000578318 NBPF3Q9H094 633 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 CWC22Q9HCG8 908 aaKnown RBP17.53■□□□□ 0.4
ITGB4-204ENST00000578318 OGDHLQ9ULD0 1010 aa17.53■□□□□ 0.4
ITGB4-204ENST00000578318 RANBP2P49792 3224 aaKnown RBP17.53■□□□□ 0.4
ITGB4-204ENST00000578318 A0A1W2PPC1 479 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 APBB1O00213 710 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 GOLIM4O00461 696 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 RAB11FIP3O75154 756 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 CNMDO75829 334 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 GABPAQ06546 454 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 ACER1Q8TDN7 264 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 APBA2Q99767 749 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 CHMP4BQ9H444 224 aaKnown RBP17.52■□□□□ 0.4
ITGB4-204ENST00000578318 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 MCM9Q9NXL9 1143 aa17.52■□□□□ 0.4
ITGB4-204ENST00000578318 GLRX3O76003 335 aaKnown RBP17.51■□□□□ 0.39
ITGB4-204ENST00000578318 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
ITGB4-204ENST00000578318 MNX1P50219 401 aaPredicted RBP17.51■□□□□ 0.39
ITGB4-204ENST00000578318 LBX2Q6XYB7 198 aa17.51■□□□□ 0.39
ITGB4-204ENST00000578318 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
ITGB4-204ENST00000578318 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
ITGB4-204ENST00000578318 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 CACNB2Q08289 660 aaPredicted RBP17.5■□□□□ 0.39
ITGB4-204ENST00000578318 MAP2K5Q13163 448 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 CCL14Q16627 93 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 SIRT2Q8IXJ6 389 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 LCORLQ8N3X6 602 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 SDR42E1Q8WUS8 393 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 DCP1AQ9NPI6 582 aaPredicted RBP17.5■□□□□ 0.39
ITGB4-204ENST00000578318 MYH7P12883 1935 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 SZT2Q5T011 3432 aa17.5■□□□□ 0.39
ITGB4-204ENST00000578318 MPHOSPH10O00566 681 aaKnown RBP17.49■□□□□ 0.39
ITGB4-204ENST00000578318 SEPT2Q15019 361 aa17.49■□□□□ 0.39
ITGB4-204ENST00000578318 C7orf61Q8IZ16 206 aa17.49■□□□□ 0.39
ITGB4-204ENST00000578318 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
ITGB4-204ENST00000578318 PAG1Q9NWQ8 432 aa17.49■□□□□ 0.39
ITGB4-204ENST00000578318 SWAP70Q9UH65 585 aa17.49■□□□□ 0.39
ITGB4-204ENST00000578318 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
ITGB4-204ENST00000578318 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
ITGB4-204ENST00000578318 SPDYE16A6NNV3 312 aaPredicted RBP17.48■□□□□ 0.39
ITGB4-204ENST00000578318 PTPREP23469 700 aa17.48■□□□□ 0.39
ITGB4-204ENST00000578318 CCND3P30281 292 aaPredicted RBP17.48■□□□□ 0.39
ITGB4-204ENST00000578318 WDR78Q5VTH9 848 aa17.48■□□□□ 0.39
ITGB4-204ENST00000578318 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
ITGB4-204ENST00000578318 BCL11AQ9H165 835 aa17.48■□□□□ 0.39
ITGB4-204ENST00000578318 BTBD7Q9P203 1132 aa17.48■□□□□ 0.39
ITGB4-204ENST00000578318 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
ITGB4-204ENST00000578318 BAZ2AQ9UIF9 1905 aaKnown RBP17.48■□□□□ 0.39
ITGB4-204ENST00000578318 ATP5JP18859 108 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 ADD2P35612 726 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 EVX2Q03828 476 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.47■□□□□ 0.39
ITGB4-204ENST00000578318 BOLA2Q9H3K6 86 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 ARMT1Q9H993 441 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 IVNS1ABPQ9Y6Y0 642 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 A0A0G2JMZ2 1700 aa17.47■□□□□ 0.39
ITGB4-204ENST00000578318 A0A1W2PRG0 241 aa17.46■□□□□ 0.39
ITGB4-204ENST00000578318 MBD4O95243 580 aa17.46■□□□□ 0.39
ITGB4-204ENST00000578318 CYP2D6P10635 497 aa17.46■□□□□ 0.39
ITGB4-204ENST00000578318 GRB14Q14449 540 aa17.46■□□□□ 0.39
ITGB4-204ENST00000578318 LHX8Q68G74 356 aa17.46■□□□□ 0.39
ITGB4-204ENST00000578318 GDF15Q99988 308 aa17.46■□□□□ 0.39
ITGB4-204ENST00000578318 ATP8A2Q9NTI2 1148 aa17.46■□□□□ 0.39
ITGB4-204ENST00000578318 HOXC10Q9NYD6 342 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms