RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 CAPN2P17655 700 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ATP5JP18859 108 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ERVK-24P63145 666 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ACER1Q8TDN7 264 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 SOCS4Q8WXH5 440 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 TRIB2Q92519 343 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 DPF3Q92784 378 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CRISPLD2Q9H0B8 497 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ALPK3Q96L96 1907 aa20.14■□□□□ 0.81
CDK5RAP3-206ENST00000578018 VCAM1P19320 739 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 MAPK4P31152 587 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 GUCY1A2P33402 732 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ADD2P35612 726 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP14P54578 494 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 TRIM32Q13049 653 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 HAUS7Q99871 368 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 PAGR1Q9BTK6 254 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 PORCNQ9H237 461 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CABP5Q9NP86 173 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 DCP1AQ9NPI6 582 aaPredicted RBP20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 PCDH10Q9P2E7 1040 aa20.13■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L15C9J2P7 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L13C9JLJ4 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L11C9JVI0 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L18D6R9N7 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L22D6RA61 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L17D6RBQ6 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L19D6RCP7 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L20D6RJB6 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 TFRCP02786 760 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP17L24Q0WX57 530 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 Q3C1V9 767 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 SLFNL1Q499Z3 407 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ARMT1Q9H993 441 aa20.12■□□□□ 0.81
CDK5RAP3-206ENST00000578018 RPTORQ8N122 1335 aa20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 MBD4O95243 580 aa20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CYP2D6P10635 497 aa20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 XRCC5P13010 732 aaKnown RBP20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CYP2B6P20813 491 aa20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 SEPT2Q15019 361 aa20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 NUDT12Q9BQG2 462 aa20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CNMDO75829 334 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 FXR1P51114 621 aaKnown RBP eCLIP20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 MAP3K21Q5TCX8 1036 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CATSPERGQ6ZRH7 1159 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 GPR142Q7Z601 462 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 SLC44A5Q8NCS7 719 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 USP6NLQ92738 828 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.1■□□□□ 0.813e-14■□□□□ 11.2
CDK5RAP3-206ENST00000578018 HMX1Q9NP08 348 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 RABGAP1Q9Y3P9 1069 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 A0A0G2JMZ2 1700 aa20.1■□□□□ 0.81
CDK5RAP3-206ENST00000578018 PRKAB2O43741 272 aa20.09■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CHGBP05060 677 aa20.09■□□□□ 0.81
CDK5RAP3-206ENST00000578018 MORN1Q5T089 497 aa20.09■□□□□ 0.81
CDK5RAP3-206ENST00000578018 LBX2Q6XYB7 198 aa20.09■□□□□ 0.81
CDK5RAP3-206ENST00000578018 RPAP3Q9H6T3 665 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP3-206ENST00000578018 RLFQ13129 1914 aa20.09■□□□□ 0.81
CDK5RAP3-206ENST00000578018 A0A1W2PRG0 241 aa20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 MPHOSPH10O00566 681 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 SMARCA5O60264 1052 aaPredicted RBP20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 PRKAR2AP13861 404 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 UBE3CQ15386 1083 aa20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CHRDL2Q6WN34 429 aa20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 PLEKHH3Q7Z736 793 aa20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 CCAR1Q8IX12 1150 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 DIS3LQ8TF46 1054 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 ATP8A2Q9NTI2 1148 aa20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 SWAP70Q9UH65 585 aa20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 NR2E3Q9Y5X4 410 aa20.08■□□□□ 0.81
CDK5RAP3-206ENST00000578018 SPDYE16A6NNV3 312 aaPredicted RBP20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 ZKSCAN1P17029 563 aaPredicted RBP20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 RGS2P41220 211 aa20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 TMEM179Q6ZVK1 233 aa20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 TRMT44Q8IYL2 757 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 ANKLE1Q8NAG6 615 aa20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 DYNLL2Q96FJ2 89 aa20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 PAWRQ96IZ0 340 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 APBA2Q99767 749 aa20.07■□□□□ 0.8
CDK5RAP3-206ENST00000578018 PARP14Q460N5 1801 aa20.06■□□□□ 0.8
CDK5RAP3-206ENST00000578018 FRMPD3Q5JV73 1810 aa20.06■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CCNA1P78396 465 aa20.06■□□□□ 0.8
CDK5RAP3-206ENST00000578018 BTBD7Q9P203 1132 aa20.06■□□□□ 0.8
CDK5RAP3-206ENST00000578018 ZNF236Q9UL36 1845 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CYP2D7A0A087X1C5 515 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 SMIM22K7EJ46 135 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 AKR1B1P15121 316 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CCL14Q16627 93 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 C12orf60Q5U649 245 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 NECAB2Q7Z6G3 386 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CWC22Q9HCG8 908 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 ECHDC1Q9NTX5 307 aa20.05■□□□□ 0.8
CDK5RAP3-206ENST00000578018 EVI5O60447 810 aa20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 MNX1P50219 401 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 CACNB2Q08289 660 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP3-206ENST00000578018 MAP2K5Q13163 448 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms