RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 SLC45A1Q9Y2W3 748 aa26.49■■□□□ 1.83
SMARCD2-206ENST00000577990 USP17L10C9JJH3 530 aa26.48■■□□□ 1.83
SMARCD2-206ENST00000577990 FOXP2O15409 715 aa26.48■■□□□ 1.83
SMARCD2-206ENST00000577990 GUCY1A2P33402 732 aa26.48■■□□□ 1.83
SMARCD2-206ENST00000577990 CCDC136Q96JN2 1154 aa26.48■■□□□ 1.83
SMARCD2-206ENST00000577990 CCDC17Q96LX7 622 aa26.48■■□□□ 1.83
SMARCD2-206ENST00000577990 PARK7Q99497 189 aaKnown RBP26.48■■□□□ 1.83
SMARCD2-206ENST00000577990 CCDC171Q6TFL3 1326 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 C19orf81C9J6K1 198 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 TLR2O60603 784 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 AKR1B1P15121 316 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 SEPT2Q15019 361 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 TREML2Q5T2D2 321 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 VPS53Q5VIR6 699 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 TMEM179Q6ZVK1 233 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 ZNF589Q86UQ0 364 aaPredicted RBP26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 TMOD4Q9NZQ9 345 aa26.47■■□□□ 1.83
SMARCD2-206ENST00000577990 EFCC1Q9HA90 598 aa26.46■■□□□ 1.83
SMARCD2-206ENST00000577990 ADGRA2Q96PE1 1338 aa26.45■■□□□ 1.83
SMARCD2-206ENST00000577990 MFAP1P55081 439 aaKnown RBP26.45■■□□□ 1.82
SMARCD2-206ENST00000577990 CWC27Q6UX04 472 aaKnown RBP26.45■■□□□ 1.82
SMARCD2-206ENST00000577990 STK11IPQ8N1F8 1099 aa26.45■■□□□ 1.82
SMARCD2-206ENST00000577990 FEZ1Q99689 392 aa26.45■■□□□ 1.82
SMARCD2-206ENST00000577990 CYP2C8P10632 490 aa26.44■■□□□ 1.82
SMARCD2-206ENST00000577990 PPARAQ07869 468 aa26.44■■□□□ 1.82
SMARCD2-206ENST00000577990 ALX1Q15699 326 aa26.44■■□□□ 1.82
SMARCD2-206ENST00000577990 USP17L2Q6R6M4 530 aa26.44■■□□□ 1.82
SMARCD2-206ENST00000577990 ACER1Q8TDN7 264 aa26.44■■□□□ 1.82
SMARCD2-206ENST00000577990 MKNK2Q9HBH9 465 aa26.44■■□□□ 1.82
SMARCD2-206ENST00000577990 PABPC4Q13310 644 aaKnown RBP eCLIP26.43■■□□□ 1.82
SMARCD2-206ENST00000577990 ZNF287Q9HBT7 754 aa26.43■■□□□ 1.82
SMARCD2-206ENST00000577990 PNMA3Q9UL41 463 aa26.43■■□□□ 1.82
SMARCD2-206ENST00000577990 PTPN22Q9Y2R2 807 aa26.43■■□□□ 1.82
SMARCD2-206ENST00000577990 KIAA0100Q14667 2235 aaKnown RBP26.43■■□□□ 1.82
SMARCD2-206ENST00000577990 ECM2O94769 699 aaPredicted RBP26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 SLC3A2P08195 630 aaKnown RBP26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 HSPD1P10809 573 aaKnown RBP26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 RASA1P20936 1047 aa26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 USP14P54578 494 aa26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 C17orf99Q6UX52 265 aa26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 KIAA1683Q9H0B3 1180 aa26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 EMILIN3Q9NT22 766 aa26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 CPA4Q9UI42 421 aa26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 BRCA2P51587 3418 aa26.42■■□□□ 1.82
SMARCD2-206ENST00000577990 ICA1Q05084 483 aa26.41■■□□□ 1.82
SMARCD2-206ENST00000577990 ZYXQ15942 572 aaKnown RBP26.41■■□□□ 1.82
SMARCD2-206ENST00000577990 C12orf42Q96LP6 360 aa26.41■■□□□ 1.82
SMARCD2-206ENST00000577990 ARHGAP39Q9C0H5 1083 aa26.41■■□□□ 1.82
SMARCD2-206ENST00000577990 ZMYM6O95789 1325 aa26.4■■□□□ 1.82
SMARCD2-206ENST00000577990 GREB1LQ9C091 1923 aaPredicted RBP26.4■■□□□ 1.82
SMARCD2-206ENST00000577990 OSBPP22059 807 aa26.4■■□□□ 1.82
SMARCD2-206ENST00000577990 PDE4BQ07343 736 aa26.4■■□□□ 1.82
SMARCD2-206ENST00000577990 CLEC10AQ8IUN9 316 aa26.4■■□□□ 1.82
SMARCD2-206ENST00000577990 SMCR8Q8TEV9 937 aaPredicted RBP26.4■■□□□ 1.82
SMARCD2-206ENST00000577990 PRDM1O75626 825 aa26.39■■□□□ 1.82
SMARCD2-206ENST00000577990 FGAP02671 866 aa26.39■■□□□ 1.82
SMARCD2-206ENST00000577990 ARHGEF10LQ9HCE6 1279 aa26.39■■□□□ 1.82
SMARCD2-206ENST00000577990 A0A1W2PRG0 241 aa26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 BCRP11274 1271 aa26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 HOXA7P31268 230 aaPredicted RBP26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 SKAP1Q86WV1 359 aa26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 ZNF444Q8N0Y2 327 aaPredicted RBP26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 ASCC2Q9H1I8 757 aaPredicted RBP26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 KANSL2Q9H9L4 492 aa26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 ANAPC4Q9UJX5 808 aa26.38■■□□□ 1.81
SMARCD2-206ENST00000577990 IRX3P78415 501 aaPredicted RBP26.37■■□□□ 1.81
SMARCD2-206ENST00000577990 CTDSPL2Q05D32 466 aa26.37■■□□□ 1.81
SMARCD2-206ENST00000577990 SIAH1Q8IUQ4 282 aa26.37■■□□□ 1.81
SMARCD2-206ENST00000577990 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.37■■□□□ 1.81
SMARCD2-206ENST00000577990 SH2D4AQ9H788 454 aa26.37■■□□□ 1.81
SMARCD2-206ENST00000577990 RBBP6Q7Z6E9 1792 aaKnown RBP26.37■■□□□ 1.81
SMARCD2-206ENST00000577990 RAD50Q92878 1312 aa26.37■■□□□ 1.81
SMARCD2-206ENST00000577990 MGAMO43451 1857 aa26.36■■□□□ 1.81
SMARCD2-206ENST00000577990 CHMLP26374 656 aa26.36■■□□□ 1.81
SMARCD2-206ENST00000577990 LACTBP83111 547 aaPredicted RBP26.36■■□□□ 1.81
SMARCD2-206ENST00000577990 ERICH6BQ5W0A0 696 aa26.36■■□□□ 1.81
SMARCD2-206ENST00000577990 PTCH2Q9Y6C5 1203 aa26.36■■□□□ 1.81
SMARCD2-206ENST00000577990 MKI67P46013 3256 aaKnown RBP26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 EEF2P13639 858 aaKnown RBP26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 VCAM1P19320 739 aa26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 KIF22Q14807 665 aa26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 ARHGEF6Q15052 776 aa26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 RUFY2Q8WXA3 655 aa26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 TMX2Q9Y320 296 aa26.35■■□□□ 1.81
SMARCD2-206ENST00000577990 GCLCP48506 637 aaPredicted RBP26.34■■□□□ 1.81
SMARCD2-206ENST00000577990 ATP2B2Q01814 1243 aa26.34■■□□□ 1.81
SMARCD2-206ENST00000577990 IL25Q9H293 177 aa26.34■■□□□ 1.81
SMARCD2-206ENST00000577990 PLIN4Q96Q06 1357 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L15C9J2P7 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L13C9JLJ4 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L11C9JVI0 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L18D6R9N7 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L22D6RA61 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L17D6RBQ6 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L19D6RCP7 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L20D6RJB6 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 USP17L24Q0WX57 530 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 DSCC1Q9BVC3 393 aa26.33■■□□□ 1.81
SMARCD2-206ENST00000577990 IGKV6D-41A0A0C4DH26 115 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms