RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 PPARAQ07869 468 aa16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 RAD9BQ6WBX8 426 aa16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 HNRNPH2P55795 449 aaKnown RBP16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 RASGRP4Q8TDF6 673 aa16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 GOLGA1Q92805 767 aa16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 CHMP4BP1P59074 171 aa16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 SUSD4Q5VX71 490 aa16.72■□□□□ 0.27
CUEDC1-206ENST00000577830 FAM193AP78312 1265 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 JAKMIP3Q5VZ66 844 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 CATIPQ7Z7H3 387 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 CNPY4Q8N129 248 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 CAPZA3Q96KX2 299 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 MED15Q96RN5 788 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 NIP7Q9Y221 180 aaKnown RBP eCLIP16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 STX10O60499 249 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 ESR2Q92731 530 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 SLC4A9Q96Q91 983 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 VPS18Q9P253 973 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 ENC1O14682 589 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 KRT2P35908 639 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 PTGDRQ13258 359 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 CC2D1AQ6P1N0 951 aaPredicted RBP16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 BRMS1Q9HCU9 246 aa16.71■□□□□ 0.27
CUEDC1-206ENST00000577830 COL18A1P39060 1754 aa16.71■□□□□ 0.26
CUEDC1-206ENST00000577830 PLCD1P51178 756 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 ADGRA1Q86SQ6 560 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 SLC35F6Q8N357 371 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 STRCQ7RTU9 1775 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 LIFRP42702 1097 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 FKBP15Q5T1M5 1219 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 TMEM139Q8IV31 216 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 ENOX1Q8TC92 643 aaKnown RBP16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 SGMS1Q86VZ5 419 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 PAGE5Q96GU1 130 aa16.7■□□□□ 0.26
CUEDC1-206ENST00000577830 LAMA4Q16363 1823 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 MORC3Q14149 939 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 MDM2Q00987 491 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 FBXL16Q8N461 479 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 TRIM10Q9UDY6 481 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 SRPRBQ9Y5M8 271 aaKnown RBP16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 ACTN4O43707 911 aaKnown RBP16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 ZMYND10O75800 440 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 VEGFAP15692 232 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 IQCA1Q86XH1 822 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
CUEDC1-206ENST00000577830 USP17L12C9JPN9 530 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 USP17L21D6R901 530 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 LONRF2Q1L5Z9 754 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 TTC38Q5R3I4 469 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 GPKOWQ92917 476 aaPredicted RBP eCLIP16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 MRFAP1Q9Y605 127 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 UBXN1Q04323 297 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 GDAQ9Y2T3 454 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 SCN11AQ9UI33 1791 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 KRT9P35527 623 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 CHRNDQ07001 517 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 GPS2Q13227 327 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 NCAPH2Q6IBW4 605 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 RGS22Q8NE09 1264 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 DRC1Q96MC2 740 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 AATFQ9NY61 560 aaKnown RBP eCLIP16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 CALCOCO1Q9P1Z2 691 aa16.68■□□□□ 0.26
CUEDC1-206ENST00000577830 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 GOLGA6L9A6NEM1 432 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 GPR161Q8N6U8 529 aaKnown RBP16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 ANKRD20A12PQ8NF67 263 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 CTCFLQ8NI51 663 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 CTAGE9A4FU28 777 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 MRPS25P82663 173 aaKnown RBP16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 CUL4BQ13620 913 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 SPATA1Q5VX52 437 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 KANK3Q6NY19 840 aa16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 ENAHQ8N8S7 591 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-206ENST00000577830 ANKRD65E5RJM6 399 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 ADGRG1Q9Y653 693 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 PP2D1A8MPX8 630 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 N4BP1O75113 896 aaKnown RBP16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 CYP2D6P10635 497 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 CYP19A1P11511 503 aaPredicted RBP16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 DNA2P51530 1060 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 DPYDQ12882 1025 aa16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
CUEDC1-206ENST00000577830 NR1I3Q14994 352 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms