RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
PTPRM-205ENST00000577827 UTP11Q9Y3A2 253 aaKnown RBP11.57□□□□□ -0.56
PTPRM-205ENST00000577827 TMEM2Q9UHN6 1383 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 KRT25Q7Z3Z0 450 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 HELBQ8NG08 1087 aaPredicted RBP11.56□□□□□ -0.56
PTPRM-205ENST00000577827 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 SEC31AO94979 1220 aaKnown RBP11.56□□□□□ -0.56
PTPRM-205ENST00000577827 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 VGLL3A8MV65 326 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 CIAO1O76071 339 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 CCDC174Q6PII3 467 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 CEP128Q6ZU80 1094 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 LZTS2Q9BRK4 669 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 TRIM7Q9C029 511 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 MROH5Q6ZUA9 1318 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 SPHKAPQ2M3C7 1700 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 UBE3CQ15386 1083 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 ASIC2Q16515 512 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 LETM2Q2VYF4 491 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 ANKRD7Q92527 254 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 FAM204AQ9H8W3 233 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 IKBKGQ9Y6K9 419 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 IQSEC2Q5JU85 1478 aa11.56□□□□□ -0.56
PTPRM-205ENST00000577827 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 A0A087WUV0 522 aaPredicted RBP11.55□□□□□ -0.56
PTPRM-205ENST00000577827 CETN3O15182 167 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 KCNQ3O43525 872 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 PPP2R5EQ16537 467 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 SYCE1Q8N0S2 351 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 SLC35F6Q8N357 371 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 RETREG2Q8NC44 543 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 ZBTB9Q96C00 473 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 MYCBPQ99417 103 aaPredicted RBP11.55□□□□□ -0.56
PTPRM-205ENST00000577827 PLIN2Q99541 437 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 USP6P35125 1406 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 BTBD18B2RXH4 712 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 HNRNPH2P55795 449 aaKnown RBP11.55□□□□□ -0.56
PTPRM-205ENST00000577827 RPS6KA1Q15418 735 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 FANCBQ8NB91 859 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 PGBD1Q96JS3 809 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 CLIC6Q96NY7 704 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 PLCB1Q9NQ66 1216 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 KMT5BQ4FZB7 885 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 FLOT1O75955 427 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 ALDH3A1P30838 453 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 TNNI2P48788 182 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 COPB1P53618 953 aaKnown RBP11.55□□□□□ -0.56
PTPRM-205ENST00000577827 NAA25Q14CX7 972 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 ZNF827Q17R98 1081 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 PARP10Q53GL7 1025 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 SPATA5Q8NB90 893 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 TLR7Q9NYK1 1049 aaKnown RBP11.55□□□□□ -0.56
PTPRM-205ENST00000577827 NKIRAS1Q9NYS0 192 aa11.55□□□□□ -0.56
PTPRM-205ENST00000577827 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 CASP14P31944 242 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 TOB2Q14106 344 aaPredicted RBP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 NONOQ15233 471 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 SEL1L2Q5TEA6 688 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 APOA5Q6Q788 366 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 RPGRQ92834 1020 aaKnown RBP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 ANKRD2Q9GZV1 360 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 GLT8D2Q9H1C3 349 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 MAGEF1Q9HAY2 307 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 CTIFO43310 598 aaKnown RBP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 VIMP08670 466 aaKnown RBP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 EEF1GP26641 437 aaKnown RBP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 ATP6V1AP38606 617 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 SFMBT2Q5VUG0 894 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 TAOK1Q7L7X3 1001 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 VPS54Q9P1Q0 977 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 NIP7Q9Y221 180 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRM-205ENST00000577827 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 GNA14O95837 355 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 TRAPPC10P48553 1259 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 CERS3Q8IU89 383 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 ATG3Q9NT62 314 aa11.54□□□□□ -0.56
PTPRM-205ENST00000577827 EPB41P11171 864 aaKnown RBP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 MRPL12P52815 198 aaKnown RBP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 CAPN7Q9Y6W3 813 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 MAST3O60307 1309 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 E7EVH7 732 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 SEMA3EO15041 775 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 LONP1P36776 959 aaKnown RBP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 ATP11AP98196 1134 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 TCIRG1Q13488 830 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 PPP4R3AQ6IN85 833 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 C2CD5Q86YS7 1000 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 SMARCC2Q8TAQ2 1214 aa11.53□□□□□ -0.56
PTPRM-205ENST00000577827 FTOQ9C0B1 505 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRM-205ENST00000577827 BLZF1Q9H2G9 400 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms