RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 MYH1P12882 1939 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ORC4O43929 436 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 GNRH1P01148 92 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 MCCP23508 829 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 PRMT2P55345 433 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 PICALMQ13492 652 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 KRT32Q14532 448 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 C16orf86Q6ZW13 317 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 AMOTL1Q8IY63 956 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 KIF2CQ99661 725 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SWAP70Q9UH65 585 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 HERC5Q9UII4 1024 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 PRUNE2Q8WUY3 3088 aa13.2□□□□□ -0.3
CDK5RAP3-204ENST00000577664 BAZ2AQ9UIF9 1905 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 EVI5O60447 810 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TCP10Q12799 353 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 FBXL16Q8N461 479 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 HOOK2Q96ED9 719 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 MTA3Q9BTC8 594 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 RNF41Q9H4P4 317 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TACC3Q9Y6A5 838 aa13.19□□□□□ -0.3
CDK5RAP3-204ENST00000577664 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 E7EWF7 191 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CAPN2P17655 700 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 PDE4BQ07343 736 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 GUCD1Q96NT3 240 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TMEM39BQ9GZU3 492 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 RAPGEFL1Q9UHV5 662 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZNF112Q9UJU3 913 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 NAV1Q8NEY1 1877 aa13.18□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CYP2D6P10635 497 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 GJA5P36382 358 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CDK8P49336 464 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 PRKG1Q13976 671 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 MFSD6Q6ZSS7 791 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 STOX1Q6ZVD7 989 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TBC1D10CQ8IV04 446 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TDHQ8IZJ6 230 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CLMNQ96JQ2 1002 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 KRT23Q9C075 422 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
CDK5RAP3-204ENST00000577664 WDR19Q8NEZ3 1342 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SIPA1L1O43166 1804 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SMIM22K7EJ46 135 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 PSMA5P28066 241 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 NOVP48745 357 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 EVX2Q03828 476 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 CCDC17Q96LX7 622 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 GINM1Q9NU53 330 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 TCP11L1Q9NUJ3 509 aa13.16□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 RASA1P20936 1047 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 SHMT1P34896 483 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 HAND2P61296 217 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 LACTBP83111 547 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZSCAN29Q8IWY8 852 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZFYVE28Q9HCC9 887 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZSWIM5Q9P217 1185 aa13.15□□□□□ -0.3
CDK5RAP3-204ENST00000577664 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
CDK5RAP3-204ENST00000577664 CCL5P13501 91 aa13.14□□□□□ -0.31
CDK5RAP3-204ENST00000577664 TRDNQ13061 729 aa13.14□□□□□ -0.31
CDK5RAP3-204ENST00000577664 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms