RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
IFT20-204ENST00000577498 TCP10L2B9ZVM9 353 aa17.64■□□□□ 0.41
IFT20-204ENST00000577498 H7C1D1 291 aa17.64■□□□□ 0.41
IFT20-204ENST00000577498 F13A1P00488 732 aa17.64■□□□□ 0.41
IFT20-204ENST00000577498 TOP1P11387 765 aaKnown RBP17.64■□□□□ 0.41
IFT20-204ENST00000577498 TNNI2P48788 182 aa17.64■□□□□ 0.41
IFT20-204ENST00000577498 CTCFLQ8NI51 663 aaPredicted RBP17.64■□□□□ 0.41
IFT20-204ENST00000577498 DNAJC18Q9H819 358 aa17.64■□□□□ 0.41
IFT20-204ENST00000577498 HERC5Q9UII4 1024 aaKnown RBP17.64■□□□□ 0.41
IFT20-204ENST00000577498 H3BQV1 296 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 FMNL1O95466 1100 aaPredicted RBP17.63■□□□□ 0.41
IFT20-204ENST00000577498 AKR1B1P15121 316 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 KIF5BP33176 963 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 SSRP1Q08945 709 aaKnown RBP17.63■□□□□ 0.41
IFT20-204ENST00000577498 TNFAIP1Q13829 316 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 CCDC144CPQ8IYA2 1237 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 PNMA1Q8ND90 353 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 WASF1Q92558 559 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 CSRNP1Q96S65 589 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 TMEM47Q9BQJ4 181 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.63■□□□□ 0.41
IFT20-204ENST00000577498 VEZTQ9HBM0 779 aa17.63■□□□□ 0.41
IFT20-204ENST00000577498 SHTN1A0MZ66 631 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 GOLGA6L22H0YM25 854 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 GNAQP50148 359 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 GRM4Q14833 912 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 NBPF9Q3BBW0 867 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 CEP95Q96GE4 821 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 MTMR4Q9NYA4 1195 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 GPRC5DQ9NZD1 345 aa17.62■□□□□ 0.41
IFT20-204ENST00000577498 GREB1LQ9C091 1923 aaPredicted RBP17.62■□□□□ 0.41
IFT20-204ENST00000577498 TBC1D12O60347 775 aa17.61■□□□□ 0.41
IFT20-204ENST00000577498 DTNBO60941 627 aa17.61■□□□□ 0.41
IFT20-204ENST00000577498 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
IFT20-204ENST00000577498 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
IFT20-204ENST00000577498 FOXD4L5Q5VV16 416 aaPredicted RBP17.61■□□□□ 0.41
IFT20-204ENST00000577498 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
IFT20-204ENST00000577498 CDC37L1Q7L3B6 337 aa17.61■□□□□ 0.41
IFT20-204ENST00000577498 FOXD4L4Q8WXT5 416 aaPredicted RBP17.61■□□□□ 0.41
IFT20-204ENST00000577498 RNF26Q9BY78 433 aaPredicted RBP17.61■□□□□ 0.41
IFT20-204ENST00000577498 RNF181Q9P0P0 153 aa17.61■□□□□ 0.41
IFT20-204ENST00000577498 STX8Q9UNK0 236 aa17.61■□□□□ 0.41
IFT20-204ENST00000577498 TTLL1O95922 423 aa17.6■□□□□ 0.41
IFT20-204ENST00000577498 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
IFT20-204ENST00000577498 C8orf76Q96K31 380 aa17.6■□□□□ 0.41
IFT20-204ENST00000577498 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
IFT20-204ENST00000577498 SLC26A6Q9BXS9 759 aa17.6■□□□□ 0.41
IFT20-204ENST00000577498 ZSCAN16Q9H4T2 348 aaPredicted RBP17.6■□□□□ 0.41
IFT20-204ENST00000577498 PGAP2Q9UHJ9 254 aa17.6■□□□□ 0.41
IFT20-204ENST00000577498 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
IFT20-204ENST00000577498 DEXIO95424 95 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 AKAP17AQ02040 695 aaKnown RBP17.59■□□□□ 0.41
IFT20-204ENST00000577498 MAP3K10Q02779 954 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 FUT2Q10981 343 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 NBR1Q14596 966 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 TBC1D10BQ4KMP7 808 aaPredicted RBP17.59■□□□□ 0.41
IFT20-204ENST00000577498 TMEM179Q6ZVK1 233 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 SAMD7Q7Z3H4 446 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 FBXO18Q8NFZ0 1043 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 PHKBQ93100 1093 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 KANSL2Q9H9L4 492 aa17.59■□□□□ 0.41
IFT20-204ENST00000577498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.59■□□□□ 0.41
IFT20-204ENST00000577498 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
IFT20-204ENST00000577498 PRPF3O43395 683 aaKnown RBP17.58■□□□□ 0.4
IFT20-204ENST00000577498 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
IFT20-204ENST00000577498 EGFRP00533 1210 aa17.58■□□□□ 0.4
IFT20-204ENST00000577498 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.4
IFT20-204ENST00000577498 RBM26Q5T8P6 1007 aaKnown RBP17.58■□□□□ 0.4
IFT20-204ENST00000577498 C9orf131Q5VYM1 1079 aa17.58■□□□□ 0.4
IFT20-204ENST00000577498 APOBEC3FQ8IUX4 373 aaKnown RBP17.58■□□□□ 0.4
IFT20-204ENST00000577498 ALG1Q9BT22 464 aa17.58■□□□□ 0.4
IFT20-204ENST00000577498 TMEM39BQ9GZU3 492 aa17.58■□□□□ 0.4
IFT20-204ENST00000577498 NYAP2Q9P242 653 aa17.58■□□□□ 0.4
IFT20-204ENST00000577498 PALM3A6NDB9 673 aaPredicted RBP17.57■□□□□ 0.4
IFT20-204ENST00000577498 MPHOSPH10O00566 681 aaKnown RBP17.57■□□□□ 0.4
IFT20-204ENST00000577498 PPFIA3O75145 1194 aa17.57■□□□□ 0.4
IFT20-204ENST00000577498 SMARCA1P28370 1054 aa17.57■□□□□ 0.4
IFT20-204ENST00000577498 RESTQ13127 1097 aa17.57■□□□□ 0.4
IFT20-204ENST00000577498 RASA3Q14644 834 aa17.57■□□□□ 0.4
IFT20-204ENST00000577498 MKL1Q969V6 931 aa17.57■□□□□ 0.4
IFT20-204ENST00000577498 SYNPO2Q9UMS6 1093 aa17.57■□□□□ 0.4
IFT20-204ENST00000577498 CNTNAP5Q8WYK1 1306 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 FAM196BA6NMK8 535 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 PLEKHA8P1O95397 391 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 PARP1P09874 1014 aaKnown RBP17.56■□□□□ 0.4
IFT20-204ENST00000577498 TRIM29Q14134 588 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 GPR162Q16538 588 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 MAD2L2Q9UI95 211 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 HACL1Q9UJ83 578 aa17.56■□□□□ 0.4
IFT20-204ENST00000577498 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
IFT20-204ENST00000577498 LMOD1P29536 600 aaPredicted RBP17.55■□□□□ 0.4
IFT20-204ENST00000577498 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
IFT20-204ENST00000577498 ASPRV1Q53RT3 343 aa17.55■□□□□ 0.4
IFT20-204ENST00000577498 SRBD1Q8N5C6 995 aaKnown RBP17.55■□□□□ 0.4
IFT20-204ENST00000577498 HOOK2Q96ED9 719 aa17.55■□□□□ 0.4
IFT20-204ENST00000577498 TEPSINQ96N21 525 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms