RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 LRRC14Q15048 493 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 ZSWIM9Q86XI8 627 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 SLITRK4Q8IW52 837 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 FLAD1Q8NFF5 587 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 RAD18Q9NS91 495 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 TMEM39AQ9NV64 488 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 CRIM1Q9NZV1 1036 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 GPN3Q9UHW5 284 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 AP4E1Q9UPM8 1137 aa6.74□□□□□ -1.33
TRAPPC8-203ENST00000577474 ENC1O14682 589 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 FBXO24O75426 580 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 CELA3AP09093 270 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 GRIA4P48058 902 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 ZNF165P49910 485 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 POU4F3Q15319 338 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 AOC3Q16853 763 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 RNF187Q5TA31 235 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 ZCRB1Q8TBF4 217 aaKnown RBP6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 SRPK1Q96SB4 655 aaKnown RBP6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 CRBNQ96SW2 442 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 MIR1-1HGQ9H1L0 117 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 ZNF576Q9H609 170 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 CYP8B1Q9UNU6 501 aa6.73□□□□□ -1.33
TRAPPC8-203ENST00000577474 METTL12A8MUP2 240 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 ENPP3O14638 875 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 CYP11A1P05108 521 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 FAM87AP0C7U9 286 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 IBSPP21815 317 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 FAM160A1Q05DH4 1040 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 MPP2Q14168 576 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 JAZF1Q86VZ6 243 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 ANKLE2Q86XL3 938 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 EMILIN2Q9BXX0 1053 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 UBP1Q9NZI7 540 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 RAPGEFL1Q9UHV5 662 aa6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.72□□□□□ -1.33
TRAPPC8-203ENST00000577474 SBNO2Q9Y2G9 1366 aa6.71□□□□□ -1.33
TRAPPC8-203ENST00000577474 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 KLF4O43474 513 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 ECEL1O95672 775 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 ETFBP38117 255 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 EIF6P56537 245 aaKnown RBP6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 HNRNPUQ00839 825 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 CDK5R2Q13319 367 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 HP1BP3Q5SSJ5 553 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 SLC23A3Q6PIS1 610 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 REXO1Q8N1G1 1221 aaKnown RBP6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 NLGN1Q8N2Q7 840 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 GATAD2BQ8WXI9 593 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 LIN37Q96GY3 246 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 DEPDC7Q96QD5 511 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 PPP1R16BQ96T49 567 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 BRINP2Q9C0B6 783 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 CLEC4MQ9H2X3 399 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 TLR6Q9Y2C9 796 aa6.71□□□□□ -1.34
TRAPPC8-203ENST00000577474 F6X3S4 739 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 BPNT1O95861 308 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 TFE3P19532 575 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 NME2P22392 152 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 KCNMB1Q16558 191 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 IFI16Q16666 785 aaKnown RBP6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 SPRED3Q2MJR0 410 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 HRASLS5Q96KN8 279 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 FERD3LQ96RJ6 166 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 CCDC113Q9H0I3 377 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 MRVI1Q9Y6F6 885 aa6.7□□□□□ -1.34
TRAPPC8-203ENST00000577474 AOC2O75106 756 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 PCDH1Q08174 1060 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 SEZ6Q53EL9 994 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 SYDE1Q6ZW31 735 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 SHDQ96IW2 340 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 SLKQ9H2G2 1235 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 MKNK2Q9HBH9 465 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 PRDM7Q9NQW5 492 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 SNTG2Q9NY99 539 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 PLAGL2Q9UPG8 496 aa6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 MRPL42Q9Y6G3 142 aaKnown RBP6.69□□□□□ -1.34
TRAPPC8-203ENST00000577474 B3GALT4O96024 378 aa6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 KRT1P04264 644 aa6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 IFRD2Q12894 506 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 TCEAL1Q15170 157 aa6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 ANGEL2Q5VTE6 544 aaKnown RBP6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 ACTR10Q9NZ32 417 aa6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 PRKAB1Q9Y478 270 aa6.68□□□□□ -1.34
TRAPPC8-203ENST00000577474 SMAD7O15105 426 aaKnown RBP6.67□□□□□ -1.34
TRAPPC8-203ENST00000577474 F13A1P00488 732 aa6.67□□□□□ -1.34
TRAPPC8-203ENST00000577474 MCM4P33991 863 aa6.67□□□□□ -1.34
TRAPPC8-203ENST00000577474 CRKP46108 304 aa6.67□□□□□ -1.34
TRAPPC8-203ENST00000577474 GIPRP48546 466 aa6.67□□□□□ -1.34
TRAPPC8-203ENST00000577474 OXCT1P55809 520 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms