RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LBX2Q6XYB7 198 aa16.33■□□□□ 0.2
COPS3-214ENST00000577246 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
COPS3-214ENST00000577246 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
COPS3-214ENST00000577246 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
COPS3-214ENST00000577246 SAP30BPQ9UHR5 308 aaKnown RBP16.33■□□□□ 0.2
COPS3-214ENST00000577246 MAST2Q6P0Q8 1798 aa16.33■□□□□ 0.2
COPS3-214ENST00000577246 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.2
COPS3-214ENST00000577246 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
COPS3-214ENST00000577246 GRB14Q14449 540 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 ZYXQ15942 572 aaKnown RBP16.32■□□□□ 0.2
COPS3-214ENST00000577246 TMED8Q6PL24 325 aaPredicted RBP16.32■□□□□ 0.2
COPS3-214ENST00000577246 CATSPERGQ6ZRH7 1159 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 ARRDC4Q8NCT1 418 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 GUCD1Q96NT3 240 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 EHD4Q9H223 541 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 SERPINB13Q9UIV8 391 aa16.32■□□□□ 0.2
COPS3-214ENST00000577246 PNMA6EA0A0J9YXQ4 647 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 KBTBD13C9JR72 458 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 CNMDO75829 334 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 CYP2E1P05181 493 aaPredicted RBP16.31■□□□□ 0.2
COPS3-214ENST00000577246 VCAM1P19320 739 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 USP5P45974 858 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
COPS3-214ENST00000577246 RTP1P59025 263 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
COPS3-214ENST00000577246 TNNI3KQ59H18 835 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 TATDN1Q6P1N9 297 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 TTC6Q86TZ1 520 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 FPGT-TNNI3KV9GXZ4 949 aa16.31■□□□□ 0.2
COPS3-214ENST00000577246 CYP7A1P22680 504 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 ABCB5Q2M3G0 1257 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 CERKLQ49MI3 558 aaPredicted RBP16.3■□□□□ 0.2
COPS3-214ENST00000577246 POTEEQ6S8J3 1075 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 FAM161BQ96MY7 647 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 SLC5A4Q9NY91 659 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 FLRT1Q9NZU1 646 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 NDUFB9Q9Y6M9 179 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 SIPA1L1O43166 1804 aa16.3■□□□□ 0.2
COPS3-214ENST00000577246 STRNO43815 780 aa16.29■□□□□ 0.2
COPS3-214ENST00000577246 ZAP70P43403 619 aa16.29■□□□□ 0.2
COPS3-214ENST00000577246 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
COPS3-214ENST00000577246 DPP9Q86TI2 863 aa16.29■□□□□ 0.2
COPS3-214ENST00000577246 ATP11BQ9Y2G3 1177 aa16.29■□□□□ 0.2
COPS3-214ENST00000577246 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
COPS3-214ENST00000577246 IDH1O75874 414 aaKnown RBP16.28■□□□□ 0.2
COPS3-214ENST00000577246 CYBAP13498 195 aa16.28■□□□□ 0.2
COPS3-214ENST00000577246 CYP2C19P33261 490 aa16.28■□□□□ 0.2
COPS3-214ENST00000577246 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
COPS3-214ENST00000577246 RPAP3Q9H6T3 665 aaPredicted RBP16.28■□□□□ 0.2
COPS3-214ENST00000577246 HOXC10Q9NYD6 342 aa16.28■□□□□ 0.2
COPS3-214ENST00000577246 UNC80Q8N2C7 3258 aa16.28■□□□□ 0.2
COPS3-214ENST00000577246 TRIM27P14373 513 aa16.27■□□□□ 0.2
COPS3-214ENST00000577246 NPLOC4Q8TAT6 608 aa16.27■□□□□ 0.2
COPS3-214ENST00000577246 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.2
COPS3-214ENST00000577246 PRDM5Q9NQX1 630 aaPredicted RBP16.27■□□□□ 0.2
COPS3-214ENST00000577246 BTBD7Q9P203 1132 aa16.27■□□□□ 0.2
COPS3-214ENST00000577246 SEPT4O43236 478 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 ADORA2AP29274 412 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 SMAD3P84022 425 aaKnown RBP16.26■□□□□ 0.19
COPS3-214ENST00000577246 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 POLA2Q14181 598 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 COG2Q14746 738 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 GJC2Q5T442 439 aaPredicted RBP16.26■□□□□ 0.19
COPS3-214ENST00000577246 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 MB21D1Q8N884 522 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 SHCBP1Q8NEM2 672 aa16.26■□□□□ 0.19
COPS3-214ENST00000577246 MAFAQ8NHW3 353 aaPredicted RBP16.26■□□□□ 0.19
COPS3-214ENST00000577246 CDX2Q99626 313 aaPredicted RBP16.26■□□□□ 0.19
COPS3-214ENST00000577246 FOCADQ5VW36 1801 aa16.25■□□□□ 0.19
COPS3-214ENST00000577246 SURF6O75683 361 aaKnown RBP16.25■□□□□ 0.19
COPS3-214ENST00000577246 SHHQ15465 462 aa16.25■□□□□ 0.19
COPS3-214ENST00000577246 MAGEB6Q8N7X4 407 aa16.25■□□□□ 0.19
COPS3-214ENST00000577246 ACER1Q8TDN7 264 aa16.25■□□□□ 0.19
COPS3-214ENST00000577246 SSH3Q8TE77 659 aa16.25■□□□□ 0.19
COPS3-214ENST00000577246 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
COPS3-214ENST00000577246 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
COPS3-214ENST00000577246 TMEM265A0A087WTH1 108 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 IGHA2P01877 340 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
COPS3-214ENST00000577246 SNX17Q15036 470 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 ABRAQ8N0Z2 381 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 TRPV1Q8NER1 839 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
COPS3-214ENST00000577246 MOV10L1Q9BXT6 1211 aaKnown RBP16.24■□□□□ 0.19
COPS3-214ENST00000577246 TANGO6Q9C0B7 1094 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 SPATC1LQ9H0A9 340 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 MROH8Q9H579 483 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 DBNLQ9UJU6 430 aaKnown RBP16.24■□□□□ 0.19
COPS3-214ENST00000577246 FRMPD3Q5JV73 1810 aa16.24■□□□□ 0.19
COPS3-214ENST00000577246 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
COPS3-214ENST00000577246 SHMT1P34896 483 aa16.23■□□□□ 0.19
COPS3-214ENST00000577246 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
COPS3-214ENST00000577246 BADQ92934 168 aa16.23■□□□□ 0.19
COPS3-214ENST00000577246 MPHOSPH10O00566 681 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms