RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 P2RX7Q99572 595 aaKnown RBP18.61■□□□□ 0.57
SF3B3-215ENST00000577085 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
SF3B3-215ENST00000577085 KIAA1683Q9H0B3 1180 aa18.61■□□□□ 0.57
SF3B3-215ENST00000577085 CWC22Q9HCG8 908 aaKnown RBP18.61■□□□□ 0.57
SF3B3-215ENST00000577085 ARPP21Q9UBL0 812 aaPredicted RBP18.61■□□□□ 0.57
SF3B3-215ENST00000577085 MYH7P12883 1935 aa18.61■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L15C9J2P7 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L13C9JLJ4 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L11C9JVI0 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L18D6R9N7 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L22D6RA61 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L17D6RBQ6 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L19D6RCP7 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L20D6RJB6 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 ADCY3O60266 1144 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 APPP05067 770 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 EVX2Q03828 476 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 USP17L24Q0WX57 530 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 HDAC1Q13547 482 aaPredicted RBP18.6■□□□□ 0.57
SF3B3-215ENST00000577085 C12orf60Q5U649 245 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 ACER1Q8TDN7 264 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 C12orf42Q96LP6 360 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 PAGR1Q9BTK6 254 aa18.6■□□□□ 0.57
SF3B3-215ENST00000577085 MGAMO43451 1857 aa18.59■□□□□ 0.57
SF3B3-215ENST00000577085 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
SF3B3-215ENST00000577085 GNAT2P19087 354 aa18.59■□□□□ 0.57
SF3B3-215ENST00000577085 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
SF3B3-215ENST00000577085 CCDC17Q96LX7 622 aa18.59■□□□□ 0.57
SF3B3-215ENST00000577085 STRBPQ96SI9 672 aaKnown RBP18.59■□□□□ 0.57
SF3B3-215ENST00000577085 SH2D4AQ9H788 454 aa18.59■□□□□ 0.57
SF3B3-215ENST00000577085 ARHGEF10LQ9HCE6 1279 aa18.59■□□□□ 0.57
SF3B3-215ENST00000577085 MORF4L1Q9UBU8 362 aa18.59■□□□□ 0.57
SF3B3-215ENST00000577085 VCAM1P19320 739 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 TDO2P48775 406 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 CDK8P49336 464 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 IRF5Q13568 498 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 CTR9Q6PD62 1173 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 NKX2-3Q8TAU0 364 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 PI4K2BQ8TCG2 481 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 PXYLP1Q8TE99 480 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 RNF208Q9H0X6 261 aa18.58■□□□□ 0.56
SF3B3-215ENST00000577085 RWDD1Q9H446 243 aaPredicted RBP18.58■□□□□ 0.56
SF3B3-215ENST00000577085 MINDY4BA8MYZ0 360 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 GPAA1O43292 621 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 CCL5P13501 91 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 ELNP15502 786 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 GUCY1A2P33402 732 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 ICA1Q05084 483 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 MTFR1Q15390 333 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 C16orf86Q6ZW13 317 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 OSBP2Q969R2 916 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 RPAP3Q9H6T3 665 aaPredicted RBP18.57■□□□□ 0.56
SF3B3-215ENST00000577085 MKNK2Q9HBH9 465 aa18.57■□□□□ 0.56
SF3B3-215ENST00000577085 RBBP6Q7Z6E9 1792 aaKnown RBP18.56■□□□□ 0.56
SF3B3-215ENST00000577085 AKR1B1P15121 316 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 MAPK4P31152 587 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 ERVK-9P63128 1117 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 ERVK-24P63145 666 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 CCNA1P78396 465 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 ATP2B2Q01814 1243 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 CATSPERGQ6ZRH7 1159 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 TANGO6Q9C0B7 1094 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 ZNF287Q9HBT7 754 aa18.56■□□□□ 0.56
SF3B3-215ENST00000577085 BAZ2AQ9UIF9 1905 aaKnown RBP18.55■□□□□ 0.56
SF3B3-215ENST00000577085 GSG1L2A8MUP6 293 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 M0R2C6 588 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 INHAP05111 366 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 WDR78Q5VTH9 848 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 RBPJLQ9UBG7 517 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 RABGAP1Q9Y3P9 1069 aa18.55■□□□□ 0.56
SF3B3-215ENST00000577085 TNRC18O15417 2968 aaPredicted RBP18.55■□□□□ 0.56
SF3B3-215ENST00000577085 RAD21O60216 631 aa18.54■□□□□ 0.56
SF3B3-215ENST00000577085 SBK1Q52WX2 424 aa18.54■□□□□ 0.56
SF3B3-215ENST00000577085 SOCS4Q8WXH5 440 aa18.54■□□□□ 0.56
SF3B3-215ENST00000577085 LPAR1Q92633 364 aa18.54■□□□□ 0.56
SF3B3-215ENST00000577085 NUDT12Q9BQG2 462 aa18.54■□□□□ 0.56
SF3B3-215ENST00000577085 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
SF3B3-215ENST00000577085 MYH8P13535 1937 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 A0A1W2PRG0 241 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 PATL2C9JE40 543 aaKnown RBP18.53■□□□□ 0.56
SF3B3-215ENST00000577085 PEX10O60683 326 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 PRPF38BQ5VTL8 546 aaKnown RBP18.53■□□□□ 0.56
SF3B3-215ENST00000577085 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 EVI5LQ96CN4 794 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 UNC93B1Q9H1C4 597 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 HOXC10Q9NYD6 342 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 BRCA2P51587 3418 aa18.53■□□□□ 0.56
SF3B3-215ENST00000577085 SMIM22K7EJ46 135 aa18.52■□□□□ 0.56
SF3B3-215ENST00000577085 HMGCRP04035 888 aa18.52■□□□□ 0.56
SF3B3-215ENST00000577085 GJB1P08034 283 aa18.52■□□□□ 0.56
SF3B3-215ENST00000577085 SLC3A2P08195 630 aaKnown RBP18.52■□□□□ 0.56
SF3B3-215ENST00000577085 CYP2B6P20813 491 aa18.52■□□□□ 0.56
SF3B3-215ENST00000577085 COG2Q14746 738 aa18.52■□□□□ 0.56
SF3B3-215ENST00000577085 PLEKHH3Q7Z736 793 aa18.52■□□□□ 0.56
SF3B3-215ENST00000577085 CLEC10AQ8IUN9 316 aa18.52■□□□□ 0.56
SF3B3-215ENST00000577085 SPICE1Q8N0Z3 855 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms