RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 LCORLQ8N3X6 602 aa14.67□□□□□ -0.06
PRPF8-215ENST00000576958 SDR42E1Q8WUS8 393 aa14.67□□□□□ -0.06
PRPF8-215ENST00000576958 TBC1D2Q9BYX2 928 aa14.67□□□□□ -0.06
PRPF8-215ENST00000576958 HMX1Q9NP08 348 aaPredicted RBP14.67□□□□□ -0.06
PRPF8-215ENST00000576958 NR2E3Q9Y5X4 410 aa14.67□□□□□ -0.06
PRPF8-215ENST00000576958 CYP2D7A0A087X1C5 515 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 C19orf81C9J6K1 198 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 PRKAB2O43741 272 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 PDE6AP16499 860 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 VCAM1P19320 739 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 SEPT2Q15019 361 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 LHX8Q68G74 356 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 USP17L2Q6R6M4 530 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 NECAB2Q7Z6G3 386 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 RHPN1Q8TCX5 695 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 DYNLL2Q96FJ2 89 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
PRPF8-215ENST00000576958 FEZ1Q99689 392 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 SERPINB13Q9UIV8 391 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 OGDHLQ9ULD0 1010 aa14.66□□□□□ -0.06
PRPF8-215ENST00000576958 RLFQ13129 1914 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 TCRBV5S4A2TA0A5A2 114 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 GOLIM4O00461 696 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 ABCB5Q2M3G0 1257 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 CERKLQ49MI3 558 aaPredicted RBP14.65□□□□□ -0.06
PRPF8-215ENST00000576958 PLEKHH3Q7Z736 793 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 NPLOC4Q8TAT6 608 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 NUDT12Q9BQG2 462 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 C11orf49Q9H6J7 331 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 RPAP3Q9H6T3 665 aaPredicted RBP14.65□□□□□ -0.06
PRPF8-215ENST00000576958 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 LAMA2P24043 3122 aaKnown RBP14.65□□□□□ -0.06
PRPF8-215ENST00000576958 ZNF532Q9HCE3 1301 aa14.65□□□□□ -0.06
PRPF8-215ENST00000576958 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
PRPF8-215ENST00000576958 MAGEB6P1A0A0J9YX57 407 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
PRPF8-215ENST00000576958 ZKSCAN1P17029 563 aaPredicted RBP14.64□□□□□ -0.07
PRPF8-215ENST00000576958 GABPAQ06546 454 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 LRRC26Q2I0M4 334 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 SLC9C2Q5TAH2 1124 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 WDR78Q5VTH9 848 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 CATSPERGQ6ZRH7 1159 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 Q7L0L9 218 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 TRPV1Q8NER1 839 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 C12orf42Q96LP6 360 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 GDF15Q99988 308 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
PRPF8-215ENST00000576958 MAGEA10P43363 369 aaPredicted RBP14.63□□□□□ -0.07
PRPF8-215ENST00000576958 MAP3K12Q12852 859 aa14.63□□□□□ -0.07
PRPF8-215ENST00000576958 C20orf194Q5TEA3 1177 aa14.63□□□□□ -0.07
PRPF8-215ENST00000576958 SIAH1Q8IUQ4 282 aa14.63□□□□□ -0.07
PRPF8-215ENST00000576958 NBPF3Q9H094 633 aa14.63□□□□□ -0.07
PRPF8-215ENST00000576958 EHD4Q9H223 541 aa14.63□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L15C9J2P7 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L13C9JLJ4 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L11C9JVI0 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L18D6R9N7 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L22D6RA61 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L17D6RBQ6 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L19D6RCP7 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L20D6RJB6 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 POLR3DP05423 398 aaPredicted RBP14.62□□□□□ -0.07
PRPF8-215ENST00000576958 COL6A1P12109 1028 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 MAPK4P31152 587 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 CYP2C19P33261 490 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 USP17L24Q0WX57 530 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 PDE3AQ14432 1141 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 ANO1Q5XXA6 986 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 APBA2Q99767 749 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 KIAA1683Q9H0B3 1180 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 MCM9Q9NXL9 1143 aa14.62□□□□□ -0.07
PRPF8-215ENST00000576958 A0A0G2JMZ2 1700 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
PRPF8-215ENST00000576958 SMARCA5O60264 1052 aaPredicted RBP14.61□□□□□ -0.07
PRPF8-215ENST00000576958 XRCC5P13010 732 aaKnown RBP14.61□□□□□ -0.07
PRPF8-215ENST00000576958 AKR1B1P15121 316 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 RGS2P41220 211 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 MAP2K5Q13163 448 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 SPICE1Q8N0Z3 855 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 ANKLE1Q8NAG6 615 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 DCP1AQ9NPI6 582 aaPredicted RBP14.61□□□□□ -0.07
PRPF8-215ENST00000576958 RABGAP1Q9Y3P9 1069 aa14.61□□□□□ -0.07
PRPF8-215ENST00000576958 MBD4O95243 580 aa14.6□□□□□ -0.07
PRPF8-215ENST00000576958 PTPREP23469 700 aa14.6□□□□□ -0.07
PRPF8-215ENST00000576958 DIEXFQ68CQ4 756 aaKnown RBP14.6□□□□□ -0.07
PRPF8-215ENST00000576958 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
PRPF8-215ENST00000576958 TTC6Q86TZ1 520 aa14.6□□□□□ -0.07
PRPF8-215ENST00000576958 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
PRPF8-215ENST00000576958 GINM1Q9NU53 330 aa14.6□□□□□ -0.07
PRPF8-215ENST00000576958 ZBED9Q6R2W3 1325 aa14.6□□□□□ -0.07
PRPF8-215ENST00000576958 A0A0C4DFX4 3053 aa14.6□□□□□ -0.07
PRPF8-215ENST00000576958 PARP14Q460N5 1801 aa14.59□□□□□ -0.07
PRPF8-215ENST00000576958 COBLO75128 1261 aa14.59□□□□□ -0.07
PRPF8-215ENST00000576958 ATN1P54259 1190 aaPredicted RBP14.59□□□□□ -0.07
PRPF8-215ENST00000576958 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
PRPF8-215ENST00000576958 PRAMEF19Q5SWL8 479 aa14.59□□□□□ -0.07
PRPF8-215ENST00000576958 ERC1Q8IUD2 1116 aa14.59□□□□□ -0.07
PRPF8-215ENST00000576958 MOV10L1Q9BXT6 1211 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms