RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 POTEJP0CG39 1038 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 MAP3K10Q02779 954 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 ICA1Q05084 483 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 SGMS1Q86VZ5 419 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 NUP133Q8WUM0 1156 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 ZNF274Q96GC6 653 aaPredicted RBP19.3■□□□□ 0.68
ERCC4-208ENST00000576348 WRNIP1Q96S55 665 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 IL17RBQ9NRM6 502 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 MTMR4Q9NYA4 1195 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 GOLGA8AA7E2F4 631 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 CTNND1O60716 968 aaKnown RBP19.29■□□□□ 0.68
ERCC4-208ENST00000576348 ASNSP08243 561 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 CALM1P0DP23 149 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 CALM2P0DP24 149 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 CALM3P0DP25 149 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 TOP1P11387 765 aaKnown RBP19.29■□□□□ 0.68
ERCC4-208ENST00000576348 CAP2P40123 477 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
ERCC4-208ENST00000576348 SEPT2Q15019 361 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 ME3Q16798 604 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 MICU3Q86XE3 530 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 RAB11FIP4Q86YS3 637 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 ZNF654Q8IZM8 581 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 SENP2Q9HC62 589 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 PICK1Q9NRD5 415 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 GINM1Q9NU53 330 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 BRPF3Q9ULD4 1205 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 ZBTB21Q9ULJ3 1066 aa19.29■□□□□ 0.68
ERCC4-208ENST00000576348 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
ERCC4-208ENST00000576348 DHX16O60231 1041 aaKnown RBP19.28■□□□□ 0.68
ERCC4-208ENST00000576348 PDIA3P30101 505 aaKnown RBP19.28■□□□□ 0.68
ERCC4-208ENST00000576348 IREB2P48200 963 aaKnown RBP19.28■□□□□ 0.68
ERCC4-208ENST00000576348 APOA5Q6Q788 366 aa19.28■□□□□ 0.68
ERCC4-208ENST00000576348 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
ERCC4-208ENST00000576348 SPRYD3Q8NCJ5 442 aa19.28■□□□□ 0.68
ERCC4-208ENST00000576348 ANKS1AQ92625 1134 aa19.28■□□□□ 0.68
ERCC4-208ENST00000576348 ARHGEF10LQ9HCE6 1279 aa19.28■□□□□ 0.68
ERCC4-208ENST00000576348 CLIP2Q9UDT6 1046 aa19.28■□□□□ 0.68
ERCC4-208ENST00000576348 PHF20L1A8MW92 1017 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CPLX1O14810 134 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 PFKFB2O60825 505 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 DDAH1O94760 285 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 LARGE1O95461 756 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 EVCP57679 992 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CCT2P78371 535 aaKnown RBP19.27■□□□□ 0.68
ERCC4-208ENST00000576348 RRP1BQ14684 758 aaKnown RBP19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CHADLQ6NUI6 762 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CPLX2Q6PUV4 134 aaKnown RBP19.27■□□□□ 0.68
ERCC4-208ENST00000576348 DLK2Q6UY11 383 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CLEC10AQ8IUN9 316 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CCDC83Q8IWF9 413 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 PNMA1Q8ND90 353 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
ERCC4-208ENST00000576348 TMEM47Q9BQJ4 181 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 MYL10Q9BUA6 226 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
ERCC4-208ENST00000576348 ZNF408Q9H9D4 720 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 FOXD4L1Q9NU39 408 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 MTMR7Q9Y216 660 aa19.27■□□□□ 0.68
ERCC4-208ENST00000576348 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.27■□□□□ 0.68
ERCC4-208ENST00000576348 CCDC196A0A1B0GTZ2 297 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 RAD21O60216 631 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 EEF2P13639 858 aaKnown RBP19.26■□□□□ 0.67
ERCC4-208ENST00000576348 INPP5BP32019 993 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 RTN1Q16799 776 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 SHROOM1Q2M3G4 852 aaPredicted RBP19.26■□□□□ 0.67
ERCC4-208ENST00000576348 RCSD1Q6JBY9 416 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 ARMC9Q7Z3E5 817 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 CCDC144CPQ8IYA2 1237 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 GTF3C6Q969F1 213 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.26■□□□□ 0.67
ERCC4-208ENST00000576348 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 ISY1Q9ULR0 285 aaKnown RBP19.26■□□□□ 0.67
ERCC4-208ENST00000576348 CSADQ9Y600 493 aa19.26■□□□□ 0.67
ERCC4-208ENST00000576348 RXRAP19793 462 aa19.25■□□□□ 0.67
ERCC4-208ENST00000576348 KIF5BP33176 963 aa19.25■□□□□ 0.67
ERCC4-208ENST00000576348 RCAN1P53805 252 aa19.25■□□□□ 0.67
ERCC4-208ENST00000576348 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
ERCC4-208ENST00000576348 SCYL3Q8IZE3 742 aa19.25■□□□□ 0.67
ERCC4-208ENST00000576348 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
ERCC4-208ENST00000576348 FEZ1Q99689 392 aa19.25■□□□□ 0.67
ERCC4-208ENST00000576348 ZNF112Q9UJU3 913 aa19.25■□□□□ 0.67
ERCC4-208ENST00000576348 SIPA1L1O43166 1804 aa19.24■□□□□ 0.67
ERCC4-208ENST00000576348 TRAF5O00463 557 aa19.24■□□□□ 0.67
ERCC4-208ENST00000576348 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
ERCC4-208ENST00000576348 CDKL5O76039 1030 aa19.24■□□□□ 0.67
ERCC4-208ENST00000576348 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
ERCC4-208ENST00000576348 NCOA5Q9HCD5 579 aaKnown RBP19.24■□□□□ 0.67
ERCC4-208ENST00000576348 RBM28Q9NW13 759 aaKnown RBP19.24■□□□□ 0.67
ERCC4-208ENST00000576348 FZD1Q9UP38 647 aa19.24■□□□□ 0.67
ERCC4-208ENST00000576348 SSC5DA1L4H1 1573 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 GUCY1A2P33402 732 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 JAG1P78504 1218 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 SCRN1Q12765 414 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 CUL4AQ13619 759 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 PPP2R5BQ15173 497 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 FANCBQ8NB91 859 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms