RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 ACER1Q8TDN7 264 aa17.9■□□□□ 0.46
TSR1-204ENST00000576112 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
TSR1-204ENST00000576112 FEZ1Q99689 392 aa17.9■□□□□ 0.46
TSR1-204ENST00000576112 APBA2Q99767 749 aa17.9■□□□□ 0.46
TSR1-204ENST00000576112 EHD4Q9H223 541 aa17.9■□□□□ 0.46
TSR1-204ENST00000576112 ZNF236Q9UL36 1845 aa17.9■□□□□ 0.46
TSR1-204ENST00000576112 VCAM1P19320 739 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 SHMT1P34896 483 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 PLCD1P51178 756 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 RAB3GAP1Q15042 981 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 LHX8Q68G74 356 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 PLEKHH3Q7Z736 793 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 AACSQ86V21 672 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 RIOK1Q9BRS2 568 aaKnown RBP17.89■□□□□ 0.45
TSR1-204ENST00000576112 FLRT1Q9NZU1 646 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 SERPINB13Q9UIV8 391 aa17.89■□□□□ 0.45
TSR1-204ENST00000576112 IGSF3O75054 1194 aa17.88■□□□□ 0.45
TSR1-204ENST00000576112 COL6A1P12109 1028 aa17.88■□□□□ 0.45
TSR1-204ENST00000576112 GUCY1A2P33402 732 aa17.88■□□□□ 0.45
TSR1-204ENST00000576112 RGS2P41220 211 aa17.88■□□□□ 0.45
TSR1-204ENST00000576112 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
TSR1-204ENST00000576112 HNRNPUQ00839 825 aaKnown RBP eCLIP17.88■□□□□ 0.45
TSR1-204ENST00000576112 GTF3C2Q8WUA4 911 aaPredicted RBP17.88■□□□□ 0.45
TSR1-204ENST00000576112 BTBD7Q9P203 1132 aa17.88■□□□□ 0.45
TSR1-204ENST00000576112 LTBP2Q14767 1821 aa17.88■□□□□ 0.45
TSR1-204ENST00000576112 MYH7P12883 1935 aa17.88■□□□□ 0.45
TSR1-204ENST00000576112 BMP8BP34820 402 aa17.87■□□□□ 0.45
TSR1-204ENST00000576112 ABCB5Q2M3G0 1257 aa17.87■□□□□ 0.45
TSR1-204ENST00000576112 CERKLQ49MI3 558 aaPredicted RBP17.87■□□□□ 0.45
TSR1-204ENST00000576112 PANK1Q8TE04 598 aa17.87■□□□□ 0.45
TSR1-204ENST00000576112 KIAA1683Q9H0B3 1180 aa17.87■□□□□ 0.45
TSR1-204ENST00000576112 IL1RAPL2Q9NP60 686 aa17.87■□□□□ 0.45
TSR1-204ENST00000576112 COL11A1P12107 1806 aaPredicted RBP17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L15C9J2P7 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L13C9JLJ4 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L11C9JVI0 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L18D6R9N7 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L22D6RA61 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L17D6RBQ6 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L19D6RCP7 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L20D6RJB6 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 USP17L24Q0WX57 530 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 MAP3K12Q12852 859 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 MAP2K5Q13163 448 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 LRRC26Q2I0M4 334 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 CATSPERGQ6ZRH7 1159 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 CCAR1Q8IX12 1150 aaKnown RBP17.86■□□□□ 0.45
TSR1-204ENST00000576112 TRMT44Q8IYL2 757 aaKnown RBP17.86■□□□□ 0.45
TSR1-204ENST00000576112 RABGAP1Q9Y3P9 1069 aa17.86■□□□□ 0.45
TSR1-204ENST00000576112 LAMA2P24043 3122 aaKnown RBP17.86■□□□□ 0.45
TSR1-204ENST00000576112 SPDYE16A6NNV3 312 aaPredicted RBP17.85■□□□□ 0.45
TSR1-204ENST00000576112 GABPAQ06546 454 aa17.85■□□□□ 0.45
TSR1-204ENST00000576112 WDR78Q5VTH9 848 aa17.85■□□□□ 0.45
TSR1-204ENST00000576112 CERS3Q8IU89 383 aa17.85■□□□□ 0.45
TSR1-204ENST00000576112 RPAP3Q9H6T3 665 aaPredicted RBP17.85■□□□□ 0.45
TSR1-204ENST00000576112 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
TSR1-204ENST00000576112 A0A1W2PRG0 241 aa17.84■□□□□ 0.45
TSR1-204ENST00000576112 CYP2D6P10635 497 aa17.84■□□□□ 0.45
TSR1-204ENST00000576112 PDE6AP16499 860 aa17.84■□□□□ 0.45
TSR1-204ENST00000576112 SEPT2Q15019 361 aa17.84■□□□□ 0.45
TSR1-204ENST00000576112 LBX2Q6XYB7 198 aa17.84■□□□□ 0.45
TSR1-204ENST00000576112 Q7L0L9 218 aa17.84■□□□□ 0.45
TSR1-204ENST00000576112 TTC6Q86TZ1 520 aa17.84■□□□□ 0.45
TSR1-204ENST00000576112 EDC3Q96F86 508 aaKnown RBP17.84■□□□□ 0.45
TSR1-204ENST00000576112 MAGEB6P1A0A0J9YX57 407 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 PTPREP23469 700 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 USP14P54578 494 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 GRB14Q14449 540 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 SLFNL1Q499Z3 407 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 KIAA1755Q5JYT7 1200 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 CLEC10AQ8IUN9 316 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 LCORLQ8N3X6 602 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 SLC44A5Q8NCS7 719 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 NPLOC4Q8TAT6 608 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 RHPN1Q8TCX5 695 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 SDR42E1Q8WUS8 393 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 CUL9Q8IWT3 2517 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 A0A0C4DFX4 3053 aa17.83■□□□□ 0.44
TSR1-204ENST00000576112 ZNF532Q9HCE3 1301 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 TCRBV5S4A2TA0A5A2 114 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 SLC15A5A6NIM6 579 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 APBB1O00213 710 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 CYP2C19P33261 490 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 CCNA1P78396 465 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 SLC9C2Q5TAH2 1124 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 TDHQ8IZJ6 230 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 TRPV1Q8NER1 839 aa17.82■□□□□ 0.44
TSR1-204ENST00000576112 UNC80Q8N2C7 3258 aa17.81■□□□□ 0.44
TSR1-204ENST00000576112 ZNFX1Q9P2E3 1918 aaKnown RBP17.81■□□□□ 0.44
TSR1-204ENST00000576112 SMIM22K7EJ46 135 aa17.81■□□□□ 0.44
TSR1-204ENST00000576112 GOLIM4O00461 696 aa17.81■□□□□ 0.44
TSR1-204ENST00000576112 POLR3DP05423 398 aaPredicted RBP17.81■□□□□ 0.44
TSR1-204ENST00000576112 DNAJC2Q99543 621 aaKnown RBP17.81■□□□□ 0.44
TSR1-204ENST00000576112 CRNKL1Q9BZJ0 848 aaKnown RBP17.81■□□□□ 0.44
TSR1-204ENST00000576112 UBE2OQ9C0C9 1292 aaKnown RBP17.81■□□□□ 0.44
TSR1-204ENST00000576112 CABP5Q9NP86 173 aa17.81■□□□□ 0.44
TSR1-204ENST00000576112 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
TSR1-204ENST00000576112 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
TSR1-204ENST00000576112 IGHA2P01877 340 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms