RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 GUCY1A2P33402 732 aa28.85■■■□□ 2.21
LITAF-213ENST00000574701 ICA1Q05084 483 aa28.85■■■□□ 2.21
LITAF-213ENST00000574701 CTDSPL2Q05D32 466 aa28.85■■■□□ 2.21
LITAF-213ENST00000574701 SH3D19Q5HYK7 790 aa28.85■■■□□ 2.21
LITAF-213ENST00000574701 PRDM1O75626 825 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 USP14P54578 494 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 CRHR2Q13324 411 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 CASC1Q6TDU7 716 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 IL25Q9H293 177 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 ARHGEF10LQ9HCE6 1279 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 PRDM10Q9NQV6 1147 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 AGTPBP1Q9UPW5 1226 aa28.84■■■□□ 2.21
LITAF-213ENST00000574701 GREB1LQ9C091 1923 aaPredicted RBP28.83■■■□□ 2.21
LITAF-213ENST00000574701 SGSM2O43147 1006 aa28.83■■■□□ 2.21
LITAF-213ENST00000574701 PABPC4Q13310 644 aaKnown RBP eCLIP28.83■■■□□ 2.21
LITAF-213ENST00000574701 GPAT2Q6NUI2 795 aa28.83■■■□□ 2.21
LITAF-213ENST00000574701 USP17L2Q6R6M4 530 aa28.83■■■□□ 2.21
LITAF-213ENST00000574701 PARK7Q99497 189 aaKnown RBP28.83■■■□□ 2.21
LITAF-213ENST00000574701 SH2D4AQ9H788 454 aa28.83■■■□□ 2.21
LITAF-213ENST00000574701 CTNNA3Q9UI47 895 aa28.83■■■□□ 2.21
LITAF-213ENST00000574701 SLC45A1Q9Y2W3 748 aa28.83■■■□□ 2.21
LITAF-213ENST00000574701 KANSL2Q9H9L4 492 aa28.82■■■□□ 2.2
LITAF-213ENST00000574701 CDC45O75419 566 aa28.81■■■□□ 2.2
LITAF-213ENST00000574701 TSPY3P0CV98 308 aa28.81■■■□□ 2.2
LITAF-213ENST00000574701 TSPY8P0CW00 308 aa28.81■■■□□ 2.2
LITAF-213ENST00000574701 HAND2P61296 217 aa28.81■■■□□ 2.2
LITAF-213ENST00000574701 ZYXQ15942 572 aaKnown RBP28.81■■■□□ 2.2
LITAF-213ENST00000574701 KIAA1683Q9H0B3 1180 aa28.81■■■□□ 2.2
LITAF-213ENST00000574701 TOMM22Q9NS69 142 aa28.81■■■□□ 2.2
LITAF-213ENST00000574701 PNMA3Q9UL41 463 aa28.81■■■□□ 2.2
LITAF-213ENST00000574701 GPR25O00155 361 aa28.8■■■□□ 2.2
LITAF-213ENST00000574701 ZNF213O14771 459 aa28.8■■■□□ 2.2
LITAF-213ENST00000574701 IMMTQ16891 758 aaKnown RBP28.8■■■□□ 2.2
LITAF-213ENST00000574701 NOM1Q5C9Z4 860 aaKnown RBP28.8■■■□□ 2.2
LITAF-213ENST00000574701 ACER1Q8TDN7 264 aa28.8■■■□□ 2.2
LITAF-213ENST00000574701 RNF41Q9H4P4 317 aaPredicted RBP28.8■■■□□ 2.2
LITAF-213ENST00000574701 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.8■■■□□ 2.2
LITAF-213ENST00000574701 PLIN4Q96Q06 1357 aa28.79■■■□□ 2.2
LITAF-213ENST00000574701 ATP2B2Q01814 1243 aa28.79■■■□□ 2.2
LITAF-213ENST00000574701 DGKZQ13574 1117 aa28.79■■■□□ 2.2
LITAF-213ENST00000574701 TREML2Q5T2D2 321 aa28.79■■■□□ 2.2
LITAF-213ENST00000574701 KIAA1211Q6ZU35 1233 aa28.79■■■□□ 2.2
LITAF-213ENST00000574701 CLEC10AQ8IUN9 316 aa28.79■■■□□ 2.2
LITAF-213ENST00000574701 TSPY2A6NKD2 308 aa28.78■■■□□ 2.2
LITAF-213ENST00000574701 PCP11498 1178 aaKnown RBP28.78■■■□□ 2.2
LITAF-213ENST00000574701 C12orf42Q96LP6 360 aa28.78■■■□□ 2.2
LITAF-213ENST00000574701 ESYT1Q9BSJ8 1104 aa28.78■■■□□ 2.2
LITAF-213ENST00000574701 R3HDMLQ9H3Y0 253 aa28.78■■■□□ 2.2
LITAF-213ENST00000574701 ORC4O43929 436 aa28.77■■■□□ 2.2
LITAF-213ENST00000574701 OSBPP22059 807 aa28.77■■■□□ 2.2
LITAF-213ENST00000574701 RRP12Q5JTH9 1297 aaKnown RBP28.77■■■□□ 2.2
LITAF-213ENST00000574701 MFSD6Q6ZSS7 791 aa28.77■■■□□ 2.2
LITAF-213ENST00000574701 EMILIN3Q9NT22 766 aa28.77■■■□□ 2.2
LITAF-213ENST00000574701 CASP8AP2Q9UKL3 1982 aa28.77■■■□□ 2.2
LITAF-213ENST00000574701 RANBP6O60518 1105 aaKnown RBP28.76■■■□□ 2.19
LITAF-213ENST00000574701 TLR2O60603 784 aa28.76■■■□□ 2.19
LITAF-213ENST00000574701 FKTNO75072 461 aa28.76■■■□□ 2.19
LITAF-213ENST00000574701 EEF2P13639 858 aaKnown RBP28.76■■■□□ 2.19
LITAF-213ENST00000574701 TFAP4Q01664 338 aa28.76■■■□□ 2.19
LITAF-213ENST00000574701 AKNAD1Q5T1N1 836 aa28.76■■■□□ 2.19
LITAF-213ENST00000574701 SMCR8Q8TEV9 937 aaPredicted RBP28.76■■■□□ 2.19
LITAF-213ENST00000574701 ZNF296Q8WUU4 475 aaPredicted RBP28.76■■■□□ 2.19
LITAF-213ENST00000574701 STAG1Q8WVM7 1258 aa28.76■■■□□ 2.19
LITAF-213ENST00000574701 U3KPZ7 1027 aaPredicted RBP28.76■■■□□ 2.19
LITAF-213ENST00000574701 FGRP09769 529 aa28.75■■■□□ 2.19
LITAF-213ENST00000574701 CYP2C8P10632 490 aa28.75■■■□□ 2.19
LITAF-213ENST00000574701 IRX3P78415 501 aaPredicted RBP28.75■■■□□ 2.19
LITAF-213ENST00000574701 FAM47AQ5JRC9 791 aa28.75■■■□□ 2.19
LITAF-213ENST00000574701 PPP4R3BQ5MIZ7 849 aa28.75■■■□□ 2.19
LITAF-213ENST00000574701 TBC1D10CQ8IV04 446 aa28.75■■■□□ 2.19
LITAF-213ENST00000574701 NEDD1Q8NHV4 660 aa28.75■■■□□ 2.19
LITAF-213ENST00000574701 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.75■■■□□ 2.19
LITAF-213ENST00000574701 TMX2Q9Y320 296 aa28.75■■■□□ 2.19
LITAF-213ENST00000574701 A0A1W2PRG0 241 aa28.74■■■□□ 2.19
LITAF-213ENST00000574701 MYH4Q9Y623 1939 aa28.74■■■□□ 2.19
LITAF-213ENST00000574701 IGKV6D-41A0A0C4DH26 115 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 VCAM1P19320 739 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 PTH1RQ03431 593 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 LPAR1Q92633 364 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 CEP95Q96GE4 821 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 GOPCQ9HD26 462 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 INCENPQ9NQS7 918 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 NYAP2Q9P242 653 aa28.73■■■□□ 2.19
LITAF-213ENST00000574701 HOXA7P31268 230 aaPredicted RBP28.72■■■□□ 2.19
LITAF-213ENST00000574701 NT5C2P49902 561 aa28.72■■■□□ 2.19
LITAF-213ENST00000574701 SP3Q02447 781 aa28.72■■■□□ 2.19
LITAF-213ENST00000574701 NBPF3Q9H094 633 aa28.72■■■□□ 2.19
LITAF-213ENST00000574701 ASCC2Q9H1I8 757 aaPredicted RBP28.72■■■□□ 2.19
LITAF-213ENST00000574701 VCPKMTQ9H867 229 aa28.72■■■□□ 2.19
LITAF-213ENST00000574701 ADGRA2Q96PE1 1338 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 TTLL1O95922 423 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 SIAH1Q8IUQ4 282 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 ERO1AQ96HE7 468 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 ANO2Q9NQ90 1003 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 MTMR4Q9NYA4 1195 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 CPA4Q9UI42 421 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 TACC3Q9Y6A5 838 aa28.71■■■□□ 2.19
LITAF-213ENST00000574701 NEDD4P46934 1319 aa28.7■■■□□ 2.19
LITAF-213ENST00000574701 USP17L15C9J2P7 530 aa28.7■■■□□ 2.18
LITAF-213ENST00000574701 USP17L13C9JLJ4 530 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms