RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 APBA2Q99767 749 aa12.18□□□□□ -0.46
HCFC1R1-206ENST00000574151 PORCNQ9H237 461 aa12.18□□□□□ -0.46
HCFC1R1-206ENST00000574151 SLC28A3Q9HAS3 691 aa12.18□□□□□ -0.46
HCFC1R1-206ENST00000574151 MSRAQ9UJ68 235 aa12.18□□□□□ -0.46
HCFC1R1-206ENST00000574151 ST18O60284 1047 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 MAPK4P31152 587 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 GCKRQ14397 625 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 TAF7LQ5H9L4 462 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 PLEKHH3Q7Z736 793 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 TRPV1Q8NER1 839 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 HERVK_113Q902F9 699 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 EDC3Q96F86 508 aaKnown RBP12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 CWC22Q9HCG8 908 aaKnown RBP12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 TMEM39AQ9NV64 488 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 USP40Q9NVE5 1235 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 COG6Q9Y2V7 657 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 BRWD1Q9NSI6 2320 aa12.17□□□□□ -0.46
HCFC1R1-206ENST00000574151 MAST3O60307 1309 aa12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 ZNF318Q5VUA4 2279 aa12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 CYP2C19P33261 490 aa12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 CASP7P55210 303 aa12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 USP34Q70CQ2 3546 aa12.16□□□□□ -0.46
HCFC1R1-206ENST00000574151 MYH2Q9UKX2 1941 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 UTYO14607 1347 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 GRM8O00222 908 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 KIAA0355O15063 1070 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 PQBP1O60828 265 aaKnown RBP12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 RGS3P49796 1198 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 NBR1Q14596 966 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 DIXDC1Q155Q3 683 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 C16orf59Q7L2K0 433 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 ANKS1AQ92625 1134 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 RBPJLQ9UBG7 517 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 ATRNL1Q5VV63 1379 aa12.15□□□□□ -0.46
HCFC1R1-206ENST00000574151 CACNA1BQ00975 2339 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 RFXAPO00287 272 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 GNAI2P04899 355 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 RAB30Q15771 203 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 TMEM240Q5SV17 173 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 ZNF280CQ8ND82 737 aa12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
HCFC1R1-206ENST00000574151 DDTLA6NHG4 134 aaPredicted RBP12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 FAM196BA6NMK8 535 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 ACRP10323 421 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 HERVK_113P62684 666 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 ERVK-9P63128 1117 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 ERVK-24P63145 666 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 FOXO4P98177 505 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 CCDC57Q2TAC2 916 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 C1orf53Q5VUE5 145 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 KRT40Q6A162 431 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 SLC44A5Q8NCS7 719 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 COG5Q9UP83 839 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
HCFC1R1-206ENST00000574151 CACNA1FO60840 1977 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 LRRC41Q15345 812 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 CAVIN4Q5BKX8 364 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 LMBR1LQ6UX01 489 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 NPLOC4Q8TAT6 608 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 HLA-CQ95604 372 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 KCNH6Q9H252 994 aa12.12□□□□□ -0.47
HCFC1R1-206ENST00000574151 PTPRZ1P23471 2315 aaPredicted RBP12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 TRANK1O15050 2925 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 HMMRO75330 724 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 CYBAP13498 195 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 MYOGP15173 224 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 PTMSP20962 102 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 RABGGTBP53611 331 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 FAAP100Q0VG06 881 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 RASIP1Q5U651 963 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 SUGT1Q9Y2Z0 365 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 MTCH2Q9Y6C9 303 aa12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
HCFC1R1-206ENST00000574151 APBB1O00213 710 aa12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 GTPBP6O43824 516 aaPredicted RBP12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 TIMP1P01033 207 aa12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 IGHDP01880 384 aa12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 PPIGQ13427 754 aaKnown RBP eCLIP12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 PRAMEF19Q5SWL8 479 aa12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 RPAP2Q8IXW5 612 aaPredicted RBP12.1□□□□□ -0.47
HCFC1R1-206ENST00000574151 SMC5Q8IY18 1101 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms