RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 AKR1B1P15121 316 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 GCLCP48506 637 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-214ENST00000574003 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 UNC93B1Q9H1C4 597 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 GINM1Q9NU53 330 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
RPAIN-214ENST00000574003 M0R2C6 588 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 VCAM1P19320 739 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 TRIM32Q13049 653 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 KBTBD3Q8NAB2 608 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 COA7Q96BR5 231 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 RNF208Q9H0X6 261 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 PORCNQ9H237 461 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 MORF4L1Q9UBU8 362 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 GJD2Q9UKL4 321 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 MYH8P13535 1937 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 PLXNB2O15031 1838 aa13.64□□□□□ -0.23
RPAIN-214ENST00000574003 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
RPAIN-214ENST00000574003 CNMDO75829 334 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 INHAP05111 366 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 CDK8P49336 464 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 C12orf60Q5U649 245 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 SLAIN1Q8ND83 568 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 PI4K2BQ8TCG2 481 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 GPATCH3Q96I76 525 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 C12orf42Q96LP6 360 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 STRBPQ96SI9 672 aaKnown RBP13.63□□□□□ -0.23
RPAIN-214ENST00000574003 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
RPAIN-214ENST00000574003 KIAA1683Q9H0B3 1180 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 ATP8A2Q9NTI2 1148 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 CEP290O15078 2479 aa13.63□□□□□ -0.23
RPAIN-214ENST00000574003 GSG1L2A8MUP6 293 aa13.62□□□□□ -0.23
RPAIN-214ENST00000574003 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
RPAIN-214ENST00000574003 ERVK-24P63145 666 aa13.62□□□□□ -0.23
RPAIN-214ENST00000574003 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
RPAIN-214ENST00000574003 ZSCAN25Q6NSZ9 544 aa13.62□□□□□ -0.23
RPAIN-214ENST00000574003 CATSPERGQ6ZRH7 1159 aa13.62□□□□□ -0.23
RPAIN-214ENST00000574003 GPRC5AQ8NFJ5 357 aa13.62□□□□□ -0.23
RPAIN-214ENST00000574003 RPAP3Q9H6T3 665 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 GPAA1O43292 621 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 CYP2B6P20813 491 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP14P54578 494 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 UBXN2AP68543 259 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 IRF5Q13568 498 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 PRPF38BQ5VTL8 546 aaKnown RBP13.61□□□□□ -0.23
RPAIN-214ENST00000574003 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 APPBP2Q92624 585 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-214ENST00000574003 BTBD7Q9P203 1132 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 SWAP70Q9UH65 585 aa13.61□□□□□ -0.23
RPAIN-214ENST00000574003 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-214ENST00000574003 MINDY4BA8MYZ0 360 aa13.6□□□□□ -0.23
RPAIN-214ENST00000574003 GJB1P08034 283 aa13.6□□□□□ -0.23
RPAIN-214ENST00000574003 ATP2B2Q01814 1243 aa13.6□□□□□ -0.23
RPAIN-214ENST00000574003 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-214ENST00000574003 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
RPAIN-214ENST00000574003 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
RPAIN-214ENST00000574003 U2AF1L4Q8WU68 220 aaKnown RBP13.6□□□□□ -0.23
RPAIN-214ENST00000574003 TTC41PQ6P2S7 1318 aa13.6□□□□□ -0.23
RPAIN-214ENST00000574003 SALL3Q9BXA9 1300 aa13.6□□□□□ -0.23
RPAIN-214ENST00000574003 MX1P20591 662 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 GJA8P48165 433 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 ICA1Q05084 483 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 CCL14Q16627 93 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 GPR142Q7Z601 462 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 PXYLP1Q8TE99 480 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 TRIB2Q92519 343 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 DEFB118Q96PH6 123 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 FSD1Q9BTV5 496 aa13.59□□□□□ -0.23
RPAIN-214ENST00000574003 RLFQ13129 1914 aa13.58□□□□□ -0.23
RPAIN-214ENST00000574003 ERC2O15083 957 aa13.58□□□□□ -0.24
RPAIN-214ENST00000574003 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
RPAIN-214ENST00000574003 EEF2P13639 858 aaKnown RBP13.58□□□□□ -0.24
RPAIN-214ENST00000574003 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
RPAIN-214ENST00000574003 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.24
RPAIN-214ENST00000574003 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPAIN-214ENST00000574003 TANGO6Q9C0B7 1094 aa13.58□□□□□ -0.24
RPAIN-214ENST00000574003 RABGAP1Q9Y3P9 1069 aa13.58□□□□□ -0.24
RPAIN-214ENST00000574003 RAD21O60216 631 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 PRDM1O75626 825 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 SGPL1O95470 568 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 IGHDP01880 384 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 APPP05067 770 aa13.57□□□□□ -0.24
RPAIN-214ENST00000574003 RASA1P20936 1047 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms