RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ASNSP08243 561 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 CYP2D6P10635 497 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 BCRP11274 1271 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
RPA1-206ENST00000573994 ADD2P35612 726 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 PSMC4P43686 418 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 SLC9C1Q4G0N8 1177 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 FOXP4Q8IVH2 680 aaPredicted RBP12.07□□□□□ -0.48
RPA1-206ENST00000573994 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 ARMC5Q96C12 935 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPA1-206ENST00000573994 AS3MTQ9HBK9 375 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 MCM9Q9NXL9 1143 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 SERPINB13Q9UIV8 391 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 SLC45A1Q9Y2W3 748 aa12.07□□□□□ -0.48
RPA1-206ENST00000573994 TNRC18O15417 2968 aaPredicted RBP12.06□□□□□ -0.48
RPA1-206ENST00000573994 PRKAB2O43741 272 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 POLR3DP05423 398 aaPredicted RBP12.06□□□□□ -0.48
RPA1-206ENST00000573994 OSBPP22059 807 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 PLCD1P51178 756 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 TTC6Q86TZ1 520 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
RPA1-206ENST00000573994 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
RPA1-206ENST00000573994 GPATCH3Q96I76 525 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 EHD4Q9H223 541 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 MYPNQ86TC9 1320 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 NAV1Q8NEY1 1877 aa12.06□□□□□ -0.48
RPA1-206ENST00000573994 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 ATAD5Q96QE3 1844 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 FAM205CA6NFA0 338 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 SHMT1P34896 483 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 FCGRTP55899 365 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 BACE1P56817 501 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 PRKCZQ05513 592 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 ZYXQ15942 572 aaKnown RBP12.05□□□□□ -0.48
RPA1-206ENST00000573994 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 ANKRD13CQ8N6S4 541 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 SLC44A5Q8NCS7 719 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 ZNF333Q96JL9 665 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 WDR18Q9BV38 432 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 DCP1AQ9NPI6 582 aaPredicted RBP12.05□□□□□ -0.48
RPA1-206ENST00000573994 SRRDQ9UH36 339 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 PTPRFP10586 1907 aa12.05□□□□□ -0.48
RPA1-206ENST00000573994 MKI67P46013 3256 aaKnown RBP12.04□□□□□ -0.48
RPA1-206ENST00000573994 GNRH1P01148 92 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
RPA1-206ENST00000573994 CERKLQ49MI3 558 aaPredicted RBP12.04□□□□□ -0.48
RPA1-206ENST00000573994 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 TATDN1Q6P1N9 297 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 FEZ1Q99689 392 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 ASCC2Q9H1I8 757 aaPredicted RBP12.04□□□□□ -0.48
RPA1-206ENST00000573994 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
RPA1-206ENST00000573994 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 PEX10O60683 326 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 GABPAQ06546 454 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
RPA1-206ENST00000573994 UBE3CQ15386 1083 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 TMEM92Q6UXU6 159 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 DYNLL2Q96FJ2 89 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 PUS7LQ9H0K6 701 aaKnown RBP12.03□□□□□ -0.48
RPA1-206ENST00000573994 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
RPA1-206ENST00000573994 GABRQQ9UN88 632 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 SLC4A4Q9Y6R1 1079 aa12.03□□□□□ -0.48
RPA1-206ENST00000573994 MYH1P12882 1939 aa12.02□□□□□ -0.49
RPA1-206ENST00000573994 MPHOSPH10O00566 681 aaKnown RBP12.02□□□□□ -0.49
RPA1-206ENST00000573994 TNPO2O14787 897 aaKnown RBP12.02□□□□□ -0.49
RPA1-206ENST00000573994 EN2P19622 333 aaPredicted RBP12.02□□□□□ -0.49
RPA1-206ENST00000573994 PRMT2P55345 433 aa12.02□□□□□ -0.49
RPA1-206ENST00000573994 FAM110CQ1W6H9 321 aa12.02□□□□□ -0.49
RPA1-206ENST00000573994 KBTBD3Q8NAB2 608 aa12.02□□□□□ -0.49
RPA1-206ENST00000573994 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
RPA1-206ENST00000573994 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.49
RPA1-206ENST00000573994 HOXD10P28358 340 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 SEPT2Q15019 361 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 MTFR1Q15390 333 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 USP17L2Q6R6M4 530 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 CLEC10AQ8IUN9 316 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 PI4K2BQ8TCG2 481 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 P2RX7Q99572 595 aaKnown RBP12.01□□□□□ -0.49
RPA1-206ENST00000573994 CABP5Q9NP86 173 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 ATP8A2Q9NTI2 1148 aa12.01□□□□□ -0.49
RPA1-206ENST00000573994 C19orf81C9J6K1 198 aa12□□□□□ -0.49
RPA1-206ENST00000573994 USP17L12C9JPN9 530 aa12□□□□□ -0.49
RPA1-206ENST00000573994 USP17L21D6R901 530 aa12□□□□□ -0.49
RPA1-206ENST00000573994 M0R2C6 588 aa12□□□□□ -0.49
RPA1-206ENST00000573994 AKR1B1P15121 316 aa12□□□□□ -0.49
RPA1-206ENST00000573994 ELNP15502 786 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms