RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 CRNKL1Q9BZJ0 848 aaKnown RBP14.79□□□□□ -0.04
CCDC40-210ENST00000573903 NBPF3Q9H094 633 aa14.79□□□□□ -0.04
CCDC40-210ENST00000573903 ANTXR1Q9H6X2 564 aa14.79□□□□□ -0.04
CCDC40-210ENST00000573903 IL1RAPL2Q9NP60 686 aa14.79□□□□□ -0.04
CCDC40-210ENST00000573903 EMILIN3Q9NT22 766 aa14.79□□□□□ -0.04
CCDC40-210ENST00000573903 RBPJLQ9UBG7 517 aa14.79□□□□□ -0.04
CCDC40-210ENST00000573903 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 HMMRO75330 724 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 WDR78Q5VTH9 848 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 GPR142Q7Z601 462 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 C7orf61Q8IZ16 206 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 RHPN1Q8TCX5 695 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 PANK1Q8TE04 598 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 KIF1BPQ96EK5 621 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 APBA2Q99767 749 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 C11orf49Q9H6J7 331 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 RABGAP1Q9Y3P9 1069 aa14.78□□□□□ -0.04
CCDC40-210ENST00000573903 TRIOBPQ9H2D6 2365 aa14.77□□□□□ -0.04
CCDC40-210ENST00000573903 PEX10O60683 326 aa14.77□□□□□ -0.05
CCDC40-210ENST00000573903 IFIT2P09913 472 aaKnown RBP14.77□□□□□ -0.05
CCDC40-210ENST00000573903 KIAA1683Q9H0B3 1180 aa14.77□□□□□ -0.05
CCDC40-210ENST00000573903 PORCNQ9H237 461 aa14.77□□□□□ -0.05
CCDC40-210ENST00000573903 PRO3102Q9H379 93 aa14.77□□□□□ -0.05
CCDC40-210ENST00000573903 OGDHLQ9ULD0 1010 aa14.77□□□□□ -0.05
CCDC40-210ENST00000573903 IVNS1ABPQ9Y6Y0 642 aa14.77□□□□□ -0.05
CCDC40-210ENST00000573903 MYH8P13535 1937 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 APBB1O00213 710 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 MPHOSPH10O00566 681 aaKnown RBP14.76□□□□□ -0.05
CCDC40-210ENST00000573903 VCAM1P19320 739 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 Q3C1V9 767 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 SLC9C2Q5TAH2 1124 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 MAP3K21Q5TCX8 1036 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 DNAJC2Q99543 621 aaKnown RBP14.76□□□□□ -0.05
CCDC40-210ENST00000573903 RIOK1Q9BRS2 568 aaKnown RBP14.76□□□□□ -0.05
CCDC40-210ENST00000573903 BCL11AQ9H165 835 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
CCDC40-210ENST00000573903 MCM9Q9NXL9 1143 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 DDX19BQ9UMR2 479 aa14.76□□□□□ -0.05
CCDC40-210ENST00000573903 GOLIM4O00461 696 aa14.75□□□□□ -0.05
CCDC40-210ENST00000573903 PDE6AP16499 860 aa14.75□□□□□ -0.05
CCDC40-210ENST00000573903 MAP2K5Q13163 448 aa14.75□□□□□ -0.05
CCDC40-210ENST00000573903 MORN1Q5T089 497 aa14.75□□□□□ -0.05
CCDC40-210ENST00000573903 CATSPERGQ6ZRH7 1159 aa14.75□□□□□ -0.05
CCDC40-210ENST00000573903 RPAP2Q8IXW5 612 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-210ENST00000573903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.75□□□□□ -0.05
CCDC40-210ENST00000573903 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
CCDC40-210ENST00000573903 ZNF532Q9HCE3 1301 aa14.74□□□□□ -0.05
CCDC40-210ENST00000573903 SHMT1P34896 483 aa14.74□□□□□ -0.05
CCDC40-210ENST00000573903 PLCD1P51178 756 aa14.74□□□□□ -0.05
CCDC40-210ENST00000573903 CACNB2Q08289 660 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-210ENST00000573903 MFSD14CQ5VZR4 134 aa14.74□□□□□ -0.05
CCDC40-210ENST00000573903 AMOTL1Q8IY63 956 aa14.74□□□□□ -0.05
CCDC40-210ENST00000573903 USP6NLQ92738 828 aa14.74□□□□□ -0.05
CCDC40-210ENST00000573903 EDC3Q96F86 508 aaKnown RBP14.74□□□□□ -0.05
CCDC40-210ENST00000573903 RPAP3Q9H6T3 665 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-210ENST00000573903 ZMYND8Q9ULU4 1186 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-210ENST00000573903 SLC15A5A6NIM6 579 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 RAB11FIP3O75154 756 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 SEPT2Q15019 361 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 CCL14Q16627 93 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 LBX2Q6XYB7 198 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 ACER1Q8TDN7 264 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.73□□□□□ -0.05
CCDC40-210ENST00000573903 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 FRMPD3Q5JV73 1810 aa14.73□□□□□ -0.05
CCDC40-210ENST00000573903 SPDYE16A6NNV3 312 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-210ENST00000573903 CNMDO75829 334 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 PTPREP23469 700 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 CCND3P30281 292 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-210ENST00000573903 ATP2B2Q01814 1243 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 GABPAQ06546 454 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 SDR42E1Q8WUS8 393 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 YTHDC1Q96MU7 727 aaKnown RBP14.72□□□□□ -0.05
CCDC40-210ENST00000573903 TANGO6Q9C0B7 1094 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 SH2D4AQ9H788 454 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 RCAN3Q9UKA8 241 aa14.72□□□□□ -0.05
CCDC40-210ENST00000573903 MYH7P12883 1935 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 MSCO60682 206 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 SYN1P17600 705 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 BMP8BP34820 402 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-210ENST00000573903 TMEM179Q6ZVK1 233 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 LCORLQ8N3X6 602 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 GDF15Q99988 308 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 ARHGEF10LQ9HCE6 1279 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 DCP1AQ9NPI6 582 aaPredicted RBP14.71□□□□□ -0.05
CCDC40-210ENST00000573903 PAG1Q9NWQ8 432 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 HOXC10Q9NYD6 342 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 COG6Q9Y2V7 657 aa14.71□□□□□ -0.05
CCDC40-210ENST00000573903 PFASO15067 1338 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 CNGA1P29973 690 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 GUCY1A2P33402 732 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 GRB14Q14449 540 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 COG2Q14746 738 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 POTEEQ6S8J3 1075 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 ARMT1Q9H993 441 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 ATP8A2Q9NTI2 1148 aa14.7□□□□□ -0.06
CCDC40-210ENST00000573903 BTBD7Q9P203 1132 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms